PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010917671.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | TALE | ||||||||
Protein Properties | Length: 713aa MW: 79045.6 Da PI: 6.5492 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 28.5 | 2.6e-09 | 475 | 512 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gLt +qV++WF N R + XP_010917671.1 475 FEHflHPYPKDSEKLMLARQTGLTRSQVSNWFINARVR 512 664459******************************88 PP | |||||||
2 | BELL | 122.1 | 2.4e-39 | 338 | 409 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erq+lq+k +kLl +l+eVd rYkqy++q+q+v+ssF+++ag g+akpYt+lAl++iS+hFrcL+dai +qi XP_010917671.1 338 ERQDLQNKVTKLLAMLDEVDSRYKQYYHQMQIVVSSFDIIAGFGAAKPYTALALQTISQHFRCLRDAIGGQI 409 799*****************************************************************9998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 1.0E-55 | 259 | 407 | IPR006563 | POX domain |
Pfam | PF07526 | 2.6E-49 | 265 | 405 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 12.406 | 453 | 516 | IPR001356 | Homeobox domain |
SMART | SM00389 | 1.0E-9 | 456 | 520 | IPR001356 | Homeobox domain |
CDD | cd00086 | 1.82E-12 | 456 | 517 | No hit | No description |
SuperFamily | SSF46689 | 1.58E-17 | 457 | 523 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 2.4E-28 | 459 | 522 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 2.0E-17 | 473 | 512 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 713 aa Download sequence Send to blast |
MLVVSVVLSW LNRWNNYEQF AADYYSDHCI KISNCLKSRE REMATFYTSS TNQRDAMPNL 60 CLRDPGHTPY PEPSITGNML YLNYPSSSPY SDALTGDAQS QQNSVELPVP TAMISQGSSV 120 EGAHMVSSHL GKNAYNAWRD GRIEMSFMQT IGGPISGSGN LVRNSVSNEC QMGLQTQLGT 180 LNGQNLSLQQ SNVSTMQNQG LSLSLSTEIL VPSFQYRPTS SDISLFGPHQ SNLGNGGSCR 240 DDDSGNKNMH ANLSPYGVSS HTSSVPNSKY LKAAQELLVE VVNVRKALKH KADNGQSVHS 300 SAGTTGCKDT DGASKSEGMP SNPQESTANS SSELSPSERQ DLQNKVTKLL AMLDEVDSRY 360 KQYYHQMQIV VSSFDIIAGF GAAKPYTALA LQTISQHFRC LRDAIGGQIR ATRKSLGEQD 420 SSISQGGGIA RLRYIDQQLR QQRAMQQFGM MQQHSWRPQR GLPESSVSIL RAWLFEHFLH 480 PYPKDSEKLM LARQTGLTRS QVSNWFINAR VRLWKPMIED MYKEEFGGTE IDSNSSSENP 540 PKCKDEIRSS EDREDLQNFS AERSQTNQLN DSKSKAIHTM DTGRASASFQ HETNSNNAYM 600 NLKLNEQRPT SDDGSLLQDT LTHSDGSGRY MAYQMAEVGR YGNTGFSLTL GLQHCDGSVP 660 ISNNQHRFLT VRGEDIYGAA APIGADTADY EFMNMEDRQH RFGSSNLQHD FVA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4xrs_A | 7e-17 | 462 | 519 | 1 | 58 | Homeobox protein Meis1 |
4xrs_B | 7e-17 | 462 | 519 | 1 | 58 | Homeobox protein Meis1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010917671.1 | 0.0 | BEL1-like homeodomain protein 7 isoform X1 | ||||
Swissprot | Q9SIW1 | 1e-134 | BLH7_ARATH; BEL1-like homeodomain protein 7 | ||||
TrEMBL | A0A2H3ZE91 | 0.0 | A0A2H3ZE91_PHODC; BEL1-like homeodomain protein 7 isoform X1 | ||||
STRING | XP_008812196.1 | 0.0 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP901 | 38 | 131 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16400.1 | 1e-128 | BEL1-like homeodomain 7 |
Publications ? help Back to Top | |||
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