PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010917671.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family TALE
Protein Properties Length: 713aa    MW: 79045.6 Da    PI: 6.5492
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010917671.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.52.6e-094755121954
                     HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     Fe   ++yp+ +e+  LA+++gLt +qV++WF N R +
  XP_010917671.1 475 FEHflHPYPKDSEKLMLARQTGLTRSQVSNWFINARVR 512
                     664459******************************88 PP

2BELL122.12.4e-39338409172
            BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                     erq+lq+k +kLl +l+eVd rYkqy++q+q+v+ssF+++ag g+akpYt+lAl++iS+hFrcL+dai +qi
  XP_010917671.1 338 ERQDLQNKVTKLLAMLDEVDSRYKQYYHQMQIVVSSFDIIAGFGAAKPYTALALQTISQHFRCLRDAIGGQI 409
                     799*****************************************************************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.0E-55259407IPR006563POX domain
PfamPF075262.6E-49265405IPR006563POX domain
PROSITE profilePS5007112.406453516IPR001356Homeobox domain
SMARTSM003891.0E-9456520IPR001356Homeobox domain
CDDcd000861.82E-12456517No hitNo description
SuperFamilySSF466891.58E-17457523IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.4E-28459522IPR009057Homeodomain-like
PfamPF059202.0E-17473512IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 713 aa     Download sequence    Send to blast
MLVVSVVLSW LNRWNNYEQF AADYYSDHCI KISNCLKSRE REMATFYTSS TNQRDAMPNL  60
CLRDPGHTPY PEPSITGNML YLNYPSSSPY SDALTGDAQS QQNSVELPVP TAMISQGSSV  120
EGAHMVSSHL GKNAYNAWRD GRIEMSFMQT IGGPISGSGN LVRNSVSNEC QMGLQTQLGT  180
LNGQNLSLQQ SNVSTMQNQG LSLSLSTEIL VPSFQYRPTS SDISLFGPHQ SNLGNGGSCR  240
DDDSGNKNMH ANLSPYGVSS HTSSVPNSKY LKAAQELLVE VVNVRKALKH KADNGQSVHS  300
SAGTTGCKDT DGASKSEGMP SNPQESTANS SSELSPSERQ DLQNKVTKLL AMLDEVDSRY  360
KQYYHQMQIV VSSFDIIAGF GAAKPYTALA LQTISQHFRC LRDAIGGQIR ATRKSLGEQD  420
SSISQGGGIA RLRYIDQQLR QQRAMQQFGM MQQHSWRPQR GLPESSVSIL RAWLFEHFLH  480
PYPKDSEKLM LARQTGLTRS QVSNWFINAR VRLWKPMIED MYKEEFGGTE IDSNSSSENP  540
PKCKDEIRSS EDREDLQNFS AERSQTNQLN DSKSKAIHTM DTGRASASFQ HETNSNNAYM  600
NLKLNEQRPT SDDGSLLQDT LTHSDGSGRY MAYQMAEVGR YGNTGFSLTL GLQHCDGSVP  660
ISNNQHRFLT VRGEDIYGAA APIGADTADY EFMNMEDRQH RFGSSNLQHD FVA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A7e-17462519158Homeobox protein Meis1
4xrs_B7e-17462519158Homeobox protein Meis1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010917671.10.0BEL1-like homeodomain protein 7 isoform X1
SwissprotQ9SIW11e-134BLH7_ARATH; BEL1-like homeodomain protein 7
TrEMBLA0A2H3ZE910.0A0A2H3ZE91_PHODC; BEL1-like homeodomain protein 7 isoform X1
STRINGXP_008812196.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP90138131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16400.11e-128BEL1-like homeodomain 7
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]