PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010917392.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 386aa    MW: 43073.1 Da    PI: 4.7892
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010917392.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.4e-19115164255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++a ++k++g
  XP_010917392.1 115 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDAEARKIRG 164
                     69*******.**********954...4*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.57E-33115173No hitNo description
SuperFamilySSF541711.37E-22115174IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.2E-32115173IPR001471AP2/ERF domain
PROSITE profilePS5103224.131115172IPR001471AP2/ERF domain
SMARTSM003801.0E-37115178IPR001471AP2/ERF domain
PfamPF008477.4E-12116164IPR001471AP2/ERF domain
PRINTSPR003671.2E-11116127IPR001471AP2/ERF domain
PRINTSPR003671.2E-11138154IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MCGGAIISDF IPSGRSQRVT ADRPWPDLKK AGAKKKSRGK RQPVVRIDDD FEADFQEFND  60
ESSDSEVDAE AELVDVKPFA FPPRTPFSRD GSTILKPVEY DGTLSKSGKR KRKNQYRGIR  120
QRPWGKWAAE IRDPRKGVRV WLGTFNTAEE AARAYDAEAR KIRGKKAKVN FPDEVCASAQ  180
KCIQKATAPR APKPDQPENF KFSQSFGYLG EPDQDFYSVF DLIEEKQPIK QAENLSAFPA  240
IKPVVPTEGP GMNLYSDQGS NSFGGSDFGW EREAKTPEIT SVPVHIPTII EGEQSAFLED  300
GSPPQKKLKN YASEVVPPAE ENTAAKLSED LSVFEPYMKF LQMPHLEGSS DESINSFLSS  360
DVTQDVSDVD LWSFDDLLLP VENSIY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-211141741374Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010917392.10.0ethylene-responsive transcription factor 1
TrEMBLA0A2H3YDZ10.0A0A2H3YDZ1_PHODC; ethylene-responsive transcription factor 1-like
STRINGXP_008797374.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP103938134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.24e-52related to AP2 12