PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010917153.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family MYB_related
Protein Properties Length: 682aa    MW: 74903.5 Da    PI: 5.9148
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010917153.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.81.2e-08567615348
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                      +WT  E ++lv++v+++G g+W+ I r        Rt  ++k++w+++l
   XP_010917153.1 567 AWTLGEVLKLVEGVARYGAGRWSEIRRLAFasySYRTSVDLKDKWRNLL 615
                      7***************************999**99************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.485560619IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.3E-13562623IPR009057Homeodomain-like
SMARTSM007176.9E-9564617IPR001005SANT/Myb domain
CDDcd116606.83E-18566616No hitNo description
SuperFamilySSF466896.32E-16566625IPR009057Homeodomain-like
PfamPF002491.1E-6567615IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 682 aa     Download sequence    Send to blast
MVDGEKETEE SDFGKAGVEL STGTAVDGEK DTEESDFQKS GFGKIVASDP VVYQLVRVEG  60
DGRLVPATDD EVMEVEHLLE EDKSGLASDE ATKYFDGCVS NEGLPSKTSD FEGLSQAKNA  120
EVDSQELNAR LEYIEVMLQK VKQEERLRLS SESLNHCTKC MDANHQTLDG CNGTQACKHK  180
LQPENTSMET APSSMALNGS QSVQLEGAET HSGPANEAVI SSSTVSGTCT SSMPDFSILK  240
GEICLDNLSI RELQEAFRAT FGRQTSVKDK LWLKRRITMG LTNSCDVPTT SFVIKDHKIV  300
LKEVKEEPSK LQKSKTEAGS LPSDQVTDPT DGNFHNLPTS LTNQTEDQQV SGKRLGKPLS  360
EYDEKNEDLQ MEQFASKRVR KPTRRYIEEL SEFETRECSA RLLSSVKNSG HGQSSPKSQI  420
RPVHDIGSCG TSFSTRLDSL GGFGIQVPYV SRVRRGRPRK NFVSLMKYHP GGIAPNLVKT  480
ALGIPALQQN SEGGSRVKKA RAPPMHITQL LQNFVDEREK RDAETIYGDD EHDLGLEEFD  540
AAGDNVDGNA DTEPASKGGV RRKHHRAWTL GEVLKLVEGV ARYGAGRWSE IRRLAFASYS  600
YRTSVDLKDK WRNLLRASLA QGPSDKGAKN SRKHTSVPIP TPILSRVREL AEMHSQTSTE  660
LGPSKISGCG GRNVQEEGSG FL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1453459RRGRPRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010917153.10.0uncharacterized protein LOC105041815 isoform X5
TrEMBLA0A2H3ZMV80.0A0A2H3ZMV8_PHODC; uncharacterized protein LOC103704887 isoform X2
STRINGXP_008786580.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.21e-115TRF-like 6