PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010916623.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

BES1

Protein Properties

Length: 340aa MW: 36056.8 Da PI: 8.5705

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010916623.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	206.8	5.9e-64	3	149	2	149
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeae.aagssasaspesslq 95 +++r ptw+ErEnnkrRERrRRaiaaki+aGLR++Gny+lpk++DnneVlkALc+eAGw+ve+DGttyr+g+kp e+++ +g s s sp++s+q XP_010916623.1 3 SGTRLPTWRERENNKRRERRRRAIAAKIFAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRQGCKPVERMDvGVGGSVSPSPCTSYQ 97 689**********************************************************************777625799******* PP DUF822 96 sslkssalaspvesysaspksssfpspssldsislasa......asllpvlsvlslvsss 149 +sp +sy++sp+sssfpspss+ +++++a +sl+p+l++ls++sss XP_010916623.1 98 --------PSPHASYNPSPASSSFPSPSSSYITNANNAnkgtdgNSLIPWLKNLSSASSS 149 ........9***************9888877766899999********997766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	2.8E-66	3	144	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence Send to blast
MPSGTRLPTW RERENNKRRE RRRRAIAAKI FAGLRMYGNY RLPKHCDNNE VLKALCNEAG 60 WTVEEDGTTY RQGCKPVERM DVGVGGSVSP SPCTSYQPSP HASYNPSPAS SSFPSPSSSY 120 ITNANNANKG TDGNSLIPWL KNLSSASSSS SSSKLPNPHY LFIHGGSISA PVTPPLSSPT 180 ARSPRIKADW DDSAAQPPWA GAQYSFLPSS TPPSPGRQVI PDPAWLAGLR LPSGGPSSPT 240 YSLVSSNPFG FFKEASAGAG SSRMWTPGQS GTCSPVPGGG HADVQMSDGI SDEFAFGSSS 300 NGNLPANGLV KPWEGERIHE ECASDELELT LGSSRTRSGA

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	3e-23	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	3e-23	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	3e-23	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	3e-23	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	May function in brassinosteroid signaling. {ECO:0000250}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00248	DAP	Transfer from AT1G78700	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010916623.1	0.0	protein BZR1 homolog 3
Swissprot	Q5Z9E5	1e-138	BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBL	A0A2H3YAV7	0.0	A0A2H3YAV7_PHODC; protein BZR1 homolog 3
STRING	XP_008796066.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1366	38	112

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	1e-107	BES1/BZR1 homolog 4

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]