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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | XP_010916091.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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| Family | Nin-like | ||||||||
| Protein Properties | Length: 317aa MW: 34947.1 Da PI: 8.5905 | ||||||||
| Description | Nin-like family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | RWP-RK | 75.9 | 4.8e-24 | 40 | 84 | 4 | 48 |
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48
++s+e++skyFslpi++AA++Lgvc+++LKriCR++GI RWP+Rk
XP_010916091.1 40 KLSFEEISKYFSLPIAEAASNLGVCTSALKRICRENGIIRWPYRK 84
79******************************************9 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| PROSITE profile | PS51519 | 16.631 | 23 | 108 | IPR003035 | RWP-RK domain |
| Pfam | PF02042 | 3.2E-22 | 41 | 85 | IPR003035 | RWP-RK domain |
| Sequence ? help Back to Top |
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| Protein Sequence Length: 317 aa Download sequence Send to blast |
MTSASQSENP QQQQQIDHQL QPGGSATASP VAAPPPPSGK LSFEEISKYF SLPIAEAASN 60 LGVCTSALKR ICRENGIIRW PYRKTVEDIR KDAERERNKE LTELPKIANQ RTDVSKVMPS 120 TSVGSSSTTY GNQVQNRAPS VTQGALKLQQ GVPMPGHVLQ SQGNKFSQTN WPNMIQYRGI 180 PTFMDEFKYG FPANGLSSVS VKWWGSGNKE DTERMLPEES GTIKEENKEP HELSNETSNG 240 IVKDDHPDHS TQDVASVTGP TTSFCSLRRK AVEHGCETLK GGISKGYTSY KLGKRQRLAL 300 LQVFKSSLPD QWMDAFS |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
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| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_010916090.1 | 0.0 | uncharacterized protein LOC105041008 | ||||
| TrEMBL | A0A2H3XJ13 | 0.0 | A0A2H3XJ13_PHODC; uncharacterized protein LOC103703346 | ||||
| STRING | XP_008784393.1 | 0.0 | (Phoenix dactylifera) | ||||
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT4G35590.1 | 1e-12 | RWP-RK domain-containing protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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