PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010916090.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

Nin-like

Protein Properties

Length: 322aa MW: 35463.7 Da PI: 8.8477

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010916090.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	76	4.5e-24	40	84	4	48
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 ++s+e++skyFslpi++AA++Lgvc+++LKriCR++GI RWP+Rk XP_010916090.1 40 KLSFEEISKYFSLPIAEAASNLGVCTSALKRICRENGIIRWPYRK 84 79******************************************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	16.847	23	107	IPR003035	RWP-RK domain
Pfam	PF02042	3.0E-22	41	85	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence Send to blast
MTSASQSENP QQQQQIDHQL QPGGSATASP VAAPPPPSGK LSFEEISKYF SLPIAEAASN 60 LGVCTSALKR ICRENGIIRW PYRKFLAGKT VEDIRKDAER ERNKELTELP KIANQRTDVS 120 KVMPSTSVGS SSTTYGNQVQ NRAPSVTQGA LKLQQGVPMP GHVLQSQGNK FSQTNWPNMI 180 QYRGIPTFMD EFKYGFPANG LSSVSVKWWG SGNKEDTERM LPEESGTIKE ENKEPHELSN 240 ETSNGIVKDD HPDHSTQDVA SVTGPTTSFC SLRRKAVEHG CETLKGGISK GYTSYKLGKR 300 QRLALLQVFK SSLPDQWMDA FS

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010916090.1	0.0	uncharacterized protein LOC105041008
TrEMBL	A0A2H3XJ13	0.0	A0A2H3XJ13_PHODC; uncharacterized protein LOC103703346
STRING	XP_008784393.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6705	32	42

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35590.1	2e-12	RWP-RK domain-containing protein