PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010916039.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | VOZ | ||||||||
Protein Properties | Length: 312aa MW: 33666.8 Da PI: 4.9564 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 174.2 | 6.2e-54 | 219 | 311 | 1 | 93 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaa 93 pppsafl pkcalwdc+rpaqgsew+qdycssfhatlal+eg+pg+tpvlrp+gidlkdg+lfaal+ak+qgk+vgipecegaatakspwna+ XP_010916039.1 219 PPPSAFLMPKCALWDCPRPAQGSEWYQDYCSSFHATLALHEGPPGMTPVLRPGGIDLKDGPLFAALTAKTQGKNVGIPECEGAATAKSPWNAP 311 89******************************************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence Send to blast |
MRKGSKSGVC RSAAHRLLKE RAKNRVDDLQ GLLSDLQAAR KESRTADAAL LEEQVHQMLR 60 EWKAELDEAS TASSLLGNSD ASSDLSSYIR RMLQLNEEED DATSKLAELP PTANPKLEPL 120 AVLGSDVGGG ATAFLDEYFV SQELPEHGFL GAERYKSSLS TGVQQGALNC LEGNTNADYQ 180 QFSLHQELHH SVFTGFDASR QNGGFVVPLI SEFIPALCPP PSAFLMPKCA LWDCPRPAQG 240 SEWYQDYCSS FHATLALHEG PPGMTPVLRP GGIDLKDGPL FAALTAKTQG KNVGIPECEG 300 AATAKSPWNA PV |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010916038.1 | 0.0 | transcription factor VOZ1 isoform X1 | ||||
Swissprot | Q9SGQ0 | 1e-105 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | A0A2H3XIZ0 | 0.0 | A0A2H3XIZ0_PHODC; transcription factor VOZ1-like isoform X1 | ||||
STRING | XP_008784453.1 | 0.0 | (Phoenix dactylifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 1e-107 | vascular plant one zinc finger protein |
Publications ? help Back to Top | |||
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