PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010915311.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family MYB_related
Protein Properties Length: 1083aa    MW: 120152 Da    PI: 8.5533
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010915311.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.61.4e-084581240
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40
                      rW++e+ +++++a + +G++ Wk++a+ +  +R+  ++
   XP_010915311.1 45 SRWSKEDLKRFYEAYRTYGKD-WKKVAAVIR-NRSIDMV 81
                     59*****************99.*********.**97665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.17E-103690IPR009057Homeodomain-like
SMARTSM007174.3E-44391IPR001005SANT/Myb domain
PfamPF002492.0E-74685IPR001005SANT/Myb domain
CDDcd001674.76E-54677No hitNo description
SMARTSM011353.5E-50616717IPR033471DIRP domain
PfamPF065843.4E-31616716IPR033471DIRP domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1083 aa     Download sequence    Send to blast
MGPTKKSRVV NKCSSKANEE RPDNDGTSTN NRKIRKRKSS DVLGSRWSKE DLKRFYEAYR  60
TYGKDWKKVA AVIRNRSIDM VEALYNMNRA YLSLPEGTAT AAGLVAMMSD HYNILDGSDN  120
DRDSNQVSKA SHKSQKHGHG KPPLDMPKGC EGPHPDYLQK LSAMSSSGCP PLLKNRFGDL  180
FGGNWPRAVG KRTPRFPVPF WHDNNERNNI ISPKRHDLNF REDASADEGV HGAVLALAEA  240
SQRGRPLQIS ETCDGKAECV GSSPMWSGKT GHAQPGMTNP GYNSFGIDRE SVQGSLQSME  300
ADNGGFTSDA RLSDIEGTGA RKIQSEVKKL QGKKSKGPGI QIHQFDDARE ACSGAEEGHN  360
VRHVKDEIDT EVREQKTAIG LQDPGKKIHE LFSPDESCAL DALQTLADLS VKILLPNSAS  420
KSTKQESDKS RISVIKDRGY SSDVGVHVVQ QKSVHMNLSP NENSIFEARK TVYSSISEMS  480
KRKWKHPEEM VSVEEGKTSS SGQLVPLAKQ RKNIQMPGCS SLSTDLGRGV TSLTEPNPQV  540
LAANHPSVPT RTRNRRKISL QKAMAQRKSR FSDGVGDQGL SACSHFANSK AADLEGKLSH  600
CLSSQLLRRW CAFEWFYSSI DYPWFARSEY VEYLNYVRLG HVPRLTRCEW SIVRSSLGKP  660
RRLSKQFLSE EREKLNQYRE SVRTYYDELR AGVREGLPED LARPLSVGQR VIARHPRKGE  720
IHDGSILTVD RDQCRVQFDR PDLGVEFVMG DMKDANALGK YSASEVAVVA PHTIGNQPYT  780
SAQIQEREAD VRALVELTCA LNKQEALLME LREMNEEAAG KKKDGDSERD LGHFRKQYNT  840
MVVSWLREAS DQVRSALLVL RQRNTFHGIS ASPLHRATEK SGLAGCSGTF STFDLYNHDE  900
GSQVVEIVEN SMFKARKMVD VAVQAMSSLR NGEDALTGIE EALESKNDQC FRTESSKSRI  960
RCIPHPGNGN SQNQAVSSIL QPAITHVLNP RVQFSSADVP QILSELISSC VAAVLMIQAC  1020
TARQYPPAEV AQILEYAVAS LQPCCSQNLP IYREIETYMG IIKNQMLALI PSSSTSFCPE  1080
VSV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010915308.10.0protein ALWAYS EARLY 3
TrEMBLA0A3Q0HUY80.0A0A3Q0HUY8_PHODC; protein ALWAYS EARLY 3-like isoform X2
STRINGXP_008782502.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21430.21e-62DNA binding