PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010914790.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | GeBP | ||||||||
Protein Properties | Length: 391aa MW: 43090.2 Da PI: 5.5318 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 116 | 2.1e-36 | 112 | 210 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 lfq+lw++ Dei++LqG+++f++++g+ ++++d+ fy+++k++++++++k+qlveK+rrLKkK++++v++++sgke++f+++hd+ +fe+++ XP_010914790.1 112 LFQKLWTDADEIAILQGFLEFTSQRGTthaNYQHDTGPFYDQIKSRLQVDFNKNQLVEKLRRLKKKYRNMVNRMASGKEFVFKSPHDKATFEIAR 206 79************************98867777************************************************************* PP DUF573 94 kiWg 97 iW XP_010914790.1 207 EIWS 210 ***7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 1.9E-33 | 113 | 210 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 391 aa Download sequence Send to blast |
MASTAEDDER GAALYDEDED DSDDGVDSDE EYDDDAITDG QAATPPPAAA SAAQKLLHSS 60 SSISNPSASA SIPQNGGGGS IVAYPDGKRQ RILPPGEERK RLTVAHDESR RLFQKLWTDA 120 DEIAILQGFL EFTSQRGTTH ANYQHDTGPF YDQIKSRLQV DFNKNQLVEK LRRLKKKYRN 180 MVNRMASGKE FVFKSPHDKA TFEIAREIWS PSFKRTRNRD PGNAPNPQLQ ESSNLVPVEV 240 AEDVSLSSDH MMSRPRRRQF GRRSEGAPEM AVPVPTPVVS VPVLDHAPCS SAPIPNANLI 300 EQTVKSCLSP LFKELLQYAM GGPCAPVGAG DAGAPLNPLL LNIAGGSGAL QADEKWRKQQ 360 ILELEVYLKR VELVREQIKS KLEELRSMRS S |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010914790.1 | 0.0 | probable transcription factor At3g04930 | ||||
TrEMBL | A0A2H3Z4D8 | 0.0 | A0A2H3Z4D8_PHODC; probable transcription factor At3g04930 | ||||
STRING | XP_008807916.1 | 0.0 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP974 | 37 | 123 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28040.1 | 4e-65 | DNA-binding storekeeper protein-related transcriptional regulator |