PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010914189.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 144aa    MW: 16127.2 Da    PI: 5.7381
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010914189.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.67.3e-19654254
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54
                    +y+GVr+++ +g+Wv+eIr+p        +r++lg+f tae+Aa+a+++a++ + 
  XP_010914189.1  6 RYRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTFETAEDAARAYDEAARLMC 54
                    69******9.**********8.....334**********************8776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.92E-34565No hitNo description
SMARTSM003803.5E-40669IPR001471AP2/ERF domain
SuperFamilySSF541713.99E-21664IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.2E-34663IPR001471AP2/ERF domain
PfamPF008471.2E-11655IPR001471AP2/ERF domain
PROSITE profilePS5103221.167663IPR001471AP2/ERF domain
PRINTSPR003672.1E-11718IPR001471AP2/ERF domain
PRINTSPR003672.1E-112945IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
MPKLQRYRGV RQRHWGSWVS EIRHPLLKTR IWLGTFETAE DAARAYDEAA RLMCGPRAKT  60
NFPIDPNGTS TPSALSPSLM AKLEKCCLIS QEETKRAKVA KVDGDEEVVK LDEEYIEEMI  120
EELLHYGSVE ISCSSCSSSS SSSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-19367267ATERF1
3gcc_A5e-19367267ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010914189.11e-103ethylene-responsive transcription factor ERF003
SwissprotQ94AW54e-53ERF03_ARATH; Ethylene-responsive transcription factor ERF003
TrEMBLA0A2H3X7572e-85A0A2H3X757_PHODC; ethylene-responsive transcription factor ERF003-like
STRINGXP_008779295.13e-86(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP141835118
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.11e-36ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]