PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010912730.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | NAC | ||||||||
Protein Properties | Length: 337aa MW: 38046.1 Da PI: 9.2983 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 159.6 | 1.2e-49 | 23 | 148 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +pGfrFhPt+eel+ +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +e+ew+f+++rd+ky++g+r+nr+t+sgyWkatg dk + s++ XP_010912730.1 23 MPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPAFATIGEREWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADKMIRSEN 116 79***************************.89***************8777899***************************************** PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +glkktLvfy g+apkg +t+W+m+eyrl XP_010912730.1 117 SRPIGLKKTLVFYFGKAPKGIRTSWIMNEYRL 148 ******************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 55.3 | 22 | 169 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 4.32E-56 | 22 | 169 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.0E-25 | 24 | 148 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 337 aa Download sequence Send to blast |
MAIPAAMSGG NGEKYGHEHD IVMPGFRFHP TEEELIEFYL RRKVEGKRFN VELITFLDLY 60 RYDPWELPAF ATIGEREWFF YVPRDRKYRN GDRPNRVTTS GYWKATGADK MIRSENSRPI 120 GLKKTLVFYF GKAPKGIRTS WIMNEYRLPP DETDRNQKAE ISLCRVYKRG GVEDRFSGMH 180 RPSPSKATGP DKKHKDNHHP STFFTTPTGD SSSSEIKKIH EVGVCGSTDD ISVYSTTAPL 240 LNMTASLEDG ISLNSSSTLV STGTLLPSVS SPIATPTASE FNKMVGYHQV YLNLTNQLVQ 300 VAPQPRLPMP NSLATISDKL WAWNPLHEAG KDFTNFK |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 4e-55 | 24 | 169 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 4e-55 | 24 | 169 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 4e-55 | 24 | 169 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 4e-55 | 24 | 169 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
4dul_A | 4e-55 | 24 | 169 | 19 | 165 | NAC domain-containing protein 19 |
4dul_B | 4e-55 | 24 | 169 | 19 | 165 | NAC domain-containing protein 19 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010912730.1 | 0.0 | NAC domain-containing protein 35 | ||||
TrEMBL | A0A2H3ZLC1 | 0.0 | A0A2H3ZLC1_PHODC; NAC domain-containing protein 35-like | ||||
STRING | XP_008781961.1 | 0.0 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2826 | 37 | 87 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02450.2 | 1e-101 | NAC domain containing protein 35 |