PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010911328.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

Trihelix

Protein Properties

Length: 407aa MW: 45931.9 Da PI: 4.4841

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010911328.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	44.4	4.4e-14	143	227	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W+++ + +L++ ++ + +r++l+ W+ev+kk+++ + s qC+++++ l+k+ykk+k ++ k+ + sss+++yf++++ XP_010911328.1 143 WSEDSTFVLLDTWGDRYVKNGRKSLRSDEWSEVAKKVSQSSSaTLSDAQCRNRLDTLKKKYKKEKVRMAKH-ASSSSKWVYFKKMD 227 ***********************************77666277*********************9.566679*****8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	4.5E-19	142	229	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence Send to blast
MDDIQDDARY LPNHPYLSAH CRPFSSSSSS SSSLHRSKIA AARKSSFPPP IDRRYADEDD 60 EDEQNDMDEA MDEHDDDEDE YDGGGRHRQI RDEEEEEDSA ESRGKRRKVG KFSLGFEFAP 120 RVPRPAVVTP EGKFPAKSSP TDWSEDSTFV LLDTWGDRYV KNGRKSLRSD EWSEVAKKVS 180 QSSSATLSDA QCRNRLDTLK KKYKKEKVRM AKHASSSSKW VYFKKMDELM SSPSPPPAGV 240 RQQQAPRLPC GVDAGAYVFA SSSVYLNRSN GNDEMRDSPG DTGSEEDGNE EEDDESDGLP 300 PPTREKVSMG STDSSFRMLA DSIQKFGDIY AKMESKKRQQ MAELERMRKD FQRDLEMHKR 360 KILERAQAEI ANIRAEEGVE EEEEEEGSED DGDGDDEIDV SAENLSG

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence Send to blast

MDDIQDDARY LPNHPYLSAH CRPFSSSSSS SSSLHRSKIA AARKSSFPPP IDRRYADEDD  60
EDEQNDMDEA MDEHDDDEDE YDGGGRHRQI RDEEEEEDSA ESRGKRRKVG KFSLGFEFAP  120
RVPRPAVVTP EGKFPAKSSP TDWSEDSTFV LLDTWGDRYV KNGRKSLRSD EWSEVAKKVS  180
QSSSATLSDA QCRNRLDTLK KKYKKEKVRM AKHASSSSKW VYFKKMDELM SSPSPPPAGV  240
RQQQAPRLPC GVDAGAYVFA SSSVYLNRSN GNDEMRDSPG DTGSEEDGNE EEDDESDGLP  300
PPTREKVSMG STDSSFRMLA DSIQKFGDIY AKMESKKRQQ MAELERMRKD FQRDLEMHKR  360
KILERAQAEI ANIRAEEGVE EEEEEEGSED DGDGDDEIDV SAENLSG

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010911328.1	0.0	trihelix transcription factor ASIL1
Refseq	XP_019709215.1	0.0	trihelix transcription factor ASIL1
TrEMBL	A0A2H3Z6F4	1e-161	A0A2H3Z6F4_PHODC; trihelix transcription factor ASIL2
STRING	XP_008808856.1	1e-162	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP8090	22	24

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	9e-60	Trihelix family protein