PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010911249.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family NAC
Protein Properties Length: 467aa    MW: 52189.6 Da    PI: 4.4346
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010911249.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM94.41.9e-2981352128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevls 94 
                     p+G+rF+Pt  el+ +yLk+kv+gk+l+  ++ikev++y++ P+ L +++ + + ++ yfF+k d++ +++k++ r + + g+W  +  dk+v++
  XP_010911249.1   8 PAGYRFNPTKVELIEQYLKRKVSGKPLPS-DIIKEVELYDLRPEVLYERFPNrRIRSRYFFTKFDERFRNKKHRDRkVKNGGRWICSTGDKPVIK 101
                     89**************************9.99**************855544155688*****9999998776666478899***8888888888 PP

             NAM  95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + ++++ g+ ktL++++g++++ +kt W+m eyrl
  XP_010911249.1 102 NgGRNTGGVYKTLTYFEGNDKS-KKTGWIMTEYRL 135
                     74667789********998877.8*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.12E-335160IPR003441NAC domain
PROSITE profilePS5100535.7297160IPR003441NAC domain
PfamPF023652.1E-178135IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    Send to blast
MGEEKNFPAG YRFNPTKVEL IEQYLKRKVS GKPLPSDIIK EVELYDLRPE VLYERFPNRR  60
IRSRYFFTKF DERFRNKKHR DRKVKNGGRW ICSTGDKPVI KNGGRNTGGV YKTLTYFEGN  120
DKSKKTGWIM TEYRLSGESN RHQPPANLES DWLLCEIHYK GNKAKDDEGD DYKEEDKVED  180
QEEPDCQDQW EEGIGKRKPE PWLADGASTS YSFTCHGGDD QIPLSRGGEV KEADASTSYR  240
FDTCNGGGQI PCSGEEEMQS PCASTSYSFS NCYGDHQTLF DREVQAANES TLYCSNASHG  300
GQHIPLDIEE EVQAVDMSST YSFSTSHGFL QVPPNMACSM ITSNTAGLLP DFTHLPDDMA  360
TDIPGSSEVA ALLSGDGTGV DRFLPSFGDS HIVTGTGIED CPLEQAPGPF ACDWIIDNPE  420
ELEPFIHLIQ QDFPNLEEDM AGLPPLTEAA SPNNAQLGEK DVSCFYC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-21416212170Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010911249.10.0NAC domain-containing protein 67
TrEMBLA0A2H3X9A11e-79A0A2H3X9A1_PHODC; NAC domain-containing protein 83-like
STRINGXP_008780245.14e-80(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2942623
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15510.13e-22NAC domain containing protein 2