PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010910364.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family GRF
Protein Properties Length: 311aa    MW: 34330.2 Da    PI: 9.0821
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010910364.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC79.62.8e-2569112144
             WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 
                     d+epgrCrRtDGKkWRCsr+v+ g+k+CErH+hrgr+rsrk++e
  XP_010910364.1  69 DPEPGRCRRTDGKKWRCSREVVTGQKYCERHVHRGRNRSRKHVE 112
                     79****************************************97 PP
2QLQ46.21.4e-16135337
             QLQ  3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37
                    ++ aQ+q+L+ Q+l+yKy+++++ vP eL+++i++
  XP_010910364.1  1 MSLAQWQELELQALIYKYMISGASVPVELILPIKR 35
                    5789*****************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009513.9E-6135IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166618.81135IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088803.3E-11233IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166724.48169113IPR014977WRC domain
PfamPF088792.9E-2170112IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MSLAQWQELE LQALIYKYMI SGASVPVELI LPIKRSLLNA TPYYHHLHQY QHFQQPLLQT  60
GYWGRCVVDP EPGRCRRTDG KKWRCSREVV TGQKYCERHV HRGRNRSRKH VEIPTATATN  120
GLKTTLPLPS GKTTESHFSL SDSSATLDIL PLIQRPPDGK TVQGSLLESY YGSYSSPEFH  180
DDKPDGHVLR RFFDDWPRSQ QEPNTNTSIN ARSAASTAQL SISVPGNLSS DFSLKLSTGN  240
GDKPGPSSNR DNGDGRVHPP LPNWSSWGNH GEASMGGPLA EALRSSTSTP SPTSVLQRPN  300
GSISETSSIS T
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010910363.10.0growth-regulating factor 3 isoform X2
TrEMBLA0A3Q0I4031e-175A0A3Q0I403_PHODC; growth-regulating factor 3
STRINGXP_008793976.11e-179(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52910.13e-53growth-regulating factor 4