PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010910363.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family GRF
Protein Properties Length: 382aa    MW: 42286.1 Da    PI: 9.4023
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010910363.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC79.23.8e-25140183144
             WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 
                     d+epgrCrRtDGKkWRCsr+v+ g+k+CErH+hrgr+rsrk++e
  XP_010910363.1 140 DPEPGRCRRTDGKKWRCSREVVTGQKYCERHVHRGRNRSRKHVE 183
                     79****************************************97 PP

2QLQ49.99.6e-1871106237
             QLQ   2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 
                     +F+ aQ+q+L+ Q+l+yKy+++++ vP eL+++i++
  XP_010910363.1  71 YFSLAQWQELELQALIYKYMISGASVPVELILPIKR 106
                     7*********************************86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009513.3E-870106IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088803.2E-1271104IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166619.66771106IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166724.481140184IPR014977WRC domain
PfamPF088793.9E-21141183IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MESHQWRTQQ PSDHQHEHSA KIPKLRLADQ QQPPASALPL FAAERKTTTH TSPLFSYPNL  60
SPTGVPRVGG YFSLAQWQEL ELQALIYKYM ISGASVPVEL ILPIKRSLLN ATPYYHHLHQ  120
YQHFQQPLLQ TGYWGRCVVD PEPGRCRRTD GKKWRCSREV VTGQKYCERH VHRGRNRSRK  180
HVEIPTATAT NGLKTTLPLP SGKTTESHFS LSDSSATLDI LPLIQRPPDG KTVQGSLLES  240
YYGSYSSPEF HDDKPDGHVL RRFFDDWPRS QQEPNTNTSI NARSAASTAQ LSISVPGNLS  300
SDFSLKLSTG NGDKPGPSSN RDNGDGRVHP PLPNWSSWGN HGEASMGGPL AEALRSSTST  360
PSPTSVLQRP NGSISETSSI ST
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010910363.10.0growth-regulating factor 3 isoform X2
TrEMBLA0A3Q0I4030.0A0A3Q0I403_PHODC; growth-regulating factor 3
STRINGXP_008793976.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2546144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52910.13e-54growth-regulating factor 4