PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_010910361.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 150aa MW: 17185.5 Da PI: 9.656 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 95.8 | 6.5e-30 | 4 | 135 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkya...tgkrknratksgyWkatgkdke 91 G rF+P+d+el++ +Lkkk+ g++l+ ++i e+d+y +P++L + +++++++ewyfF+++ +k++ ++r++r + +g+Wkat k+ XP_010910361.1 4 RTGWRFQPSDDELLDSFLKKKILGQPLSY-HMIVEADVYGDDPKNLTAryNMANRDREWYFFTSTTRKHPgasDSSRASRRAGAGRWKATQGIKT 97 579************************99.88**************84347777899***********995444667777788************ PP NAM 92 vlskkgelvglkktLvfykgrapkg..ektdWvmheyrl 128 vl++++++ g k+ + + + r p+g +k+ W+m+ey++ XP_010910361.1 98 VLDSDHNVLGSKQCFCYME-RCPSGgdTKSIWLMEEYSI 135 *****************95.44444125889******86 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 7.45E-34 | 3 | 137 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 33.226 | 3 | 150 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.6E-17 | 5 | 135 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 150 aa Download sequence Send to blast |
MALRTGWRFQ PSDDELLDSF LKKKILGQPL SYHMIVEADV YGDDPKNLTA RYNMANRDRE 60 WYFFTSTTRK HPGASDSSRA SRRAGAGRWK ATQGIKTVLD SDHNVLGSKQ CFCYMERCPS 120 GGDTKSIWLM EEYSIHGLRR KAGVCNKRLE |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-22 | 1 | 135 | 13 | 140 | Stress-induced transcription factor NAC1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_010910361.1 | 1e-111 | NAC domain-containing protein 74-like | ||||
TrEMBL | A0A3Q0HWS3 | 9e-53 | A0A3Q0HWS3_PHODC; NAC domain-containing protein 30-like | ||||
STRING | XP_008802265.1 | 2e-68 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP22917 | 2 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G10490.1 | 1e-19 | NAC domain containing protein 52 |