PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010909888.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family Trihelix
Protein Properties Length: 525aa    MW: 60213.3 Da    PI: 6.0353
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010909888.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix86.43.4e-2793178187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     rW++qe+l+L+e+r ++++r+r+++ k+ lW+evs+ m +e+g++rs  +C+ek+enl k+ykk+keg+ +r++++  ++++f+qlea
  XP_010909888.1  93 RWPRQETLTLLEVRARLDSRFREAAHKASLWDEVSRIMaEEHGYQRSGRKCREKLENLYKYYKKTKEGKAGRQNGK--HYRFFRQLEA 178
                     8*************************************999******************************85555..6*******85 PP
2trihelix51.52.7e-16388469286
        trihelix   2 WtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     W ++e+     ++ ++e++l++ g +k+ lWee+s++m+  g+  s+k+Ck+k+e++n ++ k ke +kk ++++  tcpy ++l+
  XP_010909888.1 388 WLDSEII---CLKARIESKLQEeGHAKGDLWEEISAAMACLGYDPSAKRCKDKLEEINDYFMKNKECNKKLRENK-WTCPYHRHLD 469
                     6666654...45888999999648899*******************************************85555.59****9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138373.7E-1992179No hitNo description
CDDcd122031.72E-1992158No hitNo description
PROSITE profilePS500906.36593151IPR017877Myb-like domain
PfamPF138376.8E-11387471No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0010200Biological Processresponse to chitin
GO:0046621Biological Processnegative regulation of organ growth
GO:0048442Biological Processsepal development
GO:0048498Biological Processestablishment of petal orientation
GO:0090428Biological Processperianth development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0042803Molecular Functionprotein homodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 525 aa     Download sequence    Send to blast
MMETGEQYSL PDLHQLMAGK PPFPAVSHGL ADPFTAHHQS LVAGPQHYGM VLIGGEGEET  60
MSAAPHLPPP LPPPPGFFGE LRDVGAGGET QRRWPRQETL TLLEVRARLD SRFREAAHKA  120
SLWDEVSRIM AEEHGYQRSG RKCREKLENL YKYYKKTKEG KAGRQNGKHY RFFRQLEALY  180
GGNNNAITNK PLFHATNSSA TAANKELLQA HRLYELESLV LSNSSDIGSV STEEDGEEDQ  240
NTIPALQSNE LDMEKDTRTL KRSRNSWQSK IKEFVDIQVR RFMEVQEAWL EKMLNTLEHM  300
EQERISREEA WRKQEAARLD HERRLWASER AWIEARDNAI MEALEKISRR EMKPQFREFT  360
SIDILDDDVN QNGMESNITH GNLSSRRWLD SEIICLKARI ESKLQEEGHA KGDLWEEISA  420
AMACLGYDPS AKRCKDKLEE INDYFMKNKE CNKKLRENKW TCPYHRHLDS LDGQRSNCYE  480
DVPQAAETVD PQPSNGTSSS NGDLGGHHDS CFRLLISEKE FVGEQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010909888.10.0trihelix transcription factor PTL
TrEMBLA0A2H3ZGY60.0A0A2H3ZGY6_PHODC; trihelix transcription factor PTL-like
STRINGXP_008813676.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2292266
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03680.12e-78Trihelix family protein