PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010907998.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | bZIP | ||||||||
Protein Properties | Length: 377aa MW: 41069 Da PI: 7.2004 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.2 | 1e-14 | 295 | 340 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 +r+rr++kNRe+A rsR+RK+a++ eLe + k+L++eN +Lk+e XP_010907998.1 295 RRQRRMIKNRESAARSRARKQAYTVELEAELKQLKEENVRLKEEER 340 79****************************************7643 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.9E-12 | 291 | 355 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.082 | 293 | 338 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.0E-13 | 295 | 349 | No hit | No description |
SuperFamily | SSF57959 | 2.63E-10 | 295 | 343 | No hit | No description |
Pfam | PF00170 | 3.2E-12 | 295 | 341 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.21E-21 | 295 | 348 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 298 | 313 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 377 aa Download sequence Send to blast |
MASTSERRKM TSDDRQKGEE KVERELDMEI PLMRQSSIYS LTLDEIQNTV CEPGKTFGSM 60 NMDEFLANIW NVEEGQIAHA AGSEAQPNGE GAPPPPPPPP LQRQVSISIP APLCRKTVDE 120 VWTEIHRGRK VDHPQQHGSD GADPRQVTLG EMTLEDFLIK AGVVREGYHQ VVAPSPHAPP 180 PPPVTQYGVP TGYQMVGLEG APVYGQVVGV QGYGDHQVAG NGMYEVFGDG GPGYSVGNGF 240 GERVRNGYGG SXSPGSEEGV GGGQVGKSGA AEGGGGGKLG RKRALDGAVE KVVERRQRRM 300 IKNRESAARS RARKQAYTVE LEAELKQLKE ENVRLKEEER KMLALKKQVL MESMAERARV 360 NAQKTVLMLR RCNSSPW |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010907998.1 | 0.0 | LOW QUALITY PROTEIN: protein ABSCISIC ACID-INSENSITIVE 5-like | ||||
TrEMBL | A0A2H3X5H9 | 1e-165 | A0A2H3X5H9_PHODC; ABSCISIC ACID-INSENSITIVE 5-like protein 7 | ||||
TrEMBL | A0A2H3YWD7 | 1e-165 | A0A2H3YWD7_PHODC; bZIP transcription factor ABI5 homolog | ||||
STRING | XP_008778650.1 | 1e-166 | (Phoenix dactylifera) | ||||
STRING | XP_008804818.1 | 1e-166 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3830 | 35 | 58 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49720.2 | 1e-34 | abscisic acid responsive element-binding factor 1 |