PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010907856.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family MYB_related
Protein Properties Length: 119aa    MW: 13735.6 Da    PI: 6.5104
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010907856.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding383.8e-123776444
                     S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44
                     +T+eE++l+ +++++lG ++W++Ia++++  Rt++++ s+w
   XP_010907856.1 37 MTQEEEDLISRLHHLLGDNRWELIAKRLP-CRTAEEVESYW 76
                     7****************************.*********** PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.1342983IPR017930Myb domain
SMARTSM007174.2E-63382IPR001005SANT/Myb domain
CDDcd001675.12E-113677No hitNo description
PfamPF002495.7E-113777IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.3E-123877IPR009057Homeodomain-like
SuperFamilySSF466893.44E-83881IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    Send to blast
MLGIKIASLF SFVHCTYGEM QELDSANHGG KKQWPSMTQE EEDLISRLHH LLGDNRWELI  60
AKRLPCRTAE EVESYWKIKG RGEFENNKIY KPVCTRLSPS FKFTMDEPLE DTKPSQSGS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010907840.14e-72MYB-like transcription factor ETC2 isoform X2
RefseqXP_019703865.27e-72transcription factor MYB48 isoform X1
TrEMBLA0A3Q0IHY72e-60A0A3Q0IHY7_PHODC; myb-related protein Zm38-like isoform X1
STRINGXP_008806970.18e-52(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01060.32e-15CAPRICE-like MYB3