PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010907844.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 320aa    MW: 32927.5 Da    PI: 7.6764
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010907844.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.58.1e-192272256
             AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                    ++ GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a+++a++ l+ge
  XP_010907844.1 22 RFIGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDQAARTLRGE 72
                    689******.7*********....4456**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.99E-282179No hitNo description
Gene3DG3DSA:3.30.730.108.4E-292279IPR001471AP2/ERF domain
PfamPF008475.6E-132272IPR001471AP2/ERF domain
PROSITE profilePS5103220.2312279IPR001471AP2/ERF domain
SMARTSM003801.5E-332285IPR001471AP2/ERF domain
SuperFamilySSF541712.81E-202279IPR016177DNA-binding domain
PRINTSPR003679.7E-82334IPR001471AP2/ERF domain
PRINTSPR003679.7E-84561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MVGTVDGGVK ERRKKVSGEQ KRFIGVRQRP SGRWVAEIKD SLQKVRLWLG TFDTAEDAAR  60
AYDQAARTLR GENARTNFDS TITTSGAGAG ASDATGGHDR PLENMPPFSF EDHGGESAVA  120
AAEGLVGALQ AKLLDEKLAK ALGARLILLH AARKREAAMP NHGHGGWPTS STGLKATMAA  180
RPLNGRTASL FLSSSILDCP GSSGSSTSDV FGASTEAPLF LSSSIQDGPG SFSSSSSGVF  240
SISTGSSTTP VGGMSQSFDP CLGPQSSPRG KLEAAASAST DQPDGGAFAV AQGFGPSSII  300
SFLTLAEDKA SAQGPRDHQQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-161678871Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010907844.10.0uncharacterized protein LOC105034398
TrEMBLA0A2H3Z5P41e-138A0A2H3Z5P4_PHODC; uncharacterized protein LOC103720713
STRINGXP_008808773.11e-139(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP124292634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.19e-20related to AP2 11