PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010907730.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | TALE | ||||||||
Protein Properties | Length: 664aa MW: 72696.6 Da PI: 6.1421 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 27.8 | 4.2e-09 | 425 | 462 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gLt +q+++WF N R + XP_010907730.1 425 FEHflHPYPKDSEKLMLARQTGLTRSQISNWFINARVR 462 333569******************************88 PP | |||||||
2 | BELL | 110.5 | 9.9e-36 | 288 | 359 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erq+lq+k +kLl + +e+d+rYkqy++q+q+v+ssF+++ag+g+a+pYt++Al++iSr+F L+dai +qi XP_010907730.1 288 ERQDLQNKMTKLLAMSDEIDRRYKQYYHQMQIVVSSFDVAAGCGAAEPYTAVALQTISRQFCHLRDAINGQI 359 799*******************************************************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 1.7E-49 | 209 | 357 | IPR006563 | POX domain |
Pfam | PF07526 | 1.7E-44 | 215 | 355 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 13.119 | 403 | 466 | IPR001356 | Homeobox domain |
Gene3D | G3DSA:1.10.10.60 | 8.9E-29 | 405 | 477 | IPR009057 | Homeodomain-like |
SMART | SM00389 | 1.1E-10 | 406 | 470 | IPR001356 | Homeobox domain |
CDD | cd00086 | 1.55E-13 | 406 | 467 | No hit | No description |
SuperFamily | SSF46689 | 1.37E-18 | 407 | 473 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 4.5E-18 | 423 | 462 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 664 aa Download sequence Send to blast |
MATYYFSSTN QRDVMPTFYA RDTVPSSTSN MIYPNYSSVP YSDKLAGNNR SQQNSIDPPV 60 PSSMISHDSS TGGAGFASHL GERSYNALSD GRNEVLFMQA VGRSLSRLGD VVCSSVADDP 120 HMSVHTLLGI LNGHDVSLHQ SNVSAAQCQG LSLSLSTEIP VPSFQFQPGN SDISILSTDQ 180 SNSGDGRAFR DDNSRNKLIH SNASPYGLSS ITSTISGSRY LKVAQQLLDE VVSVRKALKQ 240 KSGKSQSLDS SAGTAECKDS DGISKCDGAS LNSQESNVQS PTELAPSERQ DLQNKMTKLL 300 AMSDEIDRRY KQYYHQMQIV VSSFDVAAGC GAAEPYTAVA LQTISRQFCH LRDAINGQIQ 360 ATRKSLGKQD NSSSKGVGIS RLKYIDQQLR QQRAMQHLGM VQHNAWRPQR GLPETSVSIL 420 RSWFFEHFLH PYPKDSEKLM LARQTGLTRS QISNWFINAR VRLWKPMIEE MYKEDISETE 480 MDSNSSLENV PKSKDGTGSI EEREHSKSPA TEGCHTSQLD ESSKSNISDM DMGGAAAGFQ 540 NEANVDDTFM NLVLKDQRPE GEDRGLLHDA IAQRSDGSGR FPAYQMAELG RYGNGGVSLT 600 LGLQHCDGGL PVSNSQQGFL RVGGEDVYST APPLETDAAD YNCINLVDQR HRFGPSALLR 660 DFVA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4xrs_A | 1e-16 | 412 | 469 | 1 | 58 | Homeobox protein Meis1 |
4xrs_B | 1e-16 | 412 | 469 | 1 | 58 | Homeobox protein Meis1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010907730.1 | 0.0 | BEL1-like homeodomain protein 7 | ||||
TrEMBL | A0A2H3YC92 | 0.0 | A0A2H3YC92_PHODC; BEL1-like homeodomain protein 7 isoform X1 | ||||
STRING | XP_008796599.1 | 0.0 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP901 | 38 | 131 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16400.1 | 1e-121 | BEL1-like homeodomain 7 |