PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010905861.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family TALE
Protein Properties Length: 587aa    MW: 64974.9 Da    PI: 9.7105
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010905861.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox31.23.8e-103824191954
                     HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     Fe   ++yp+ ++++ L+k++gLt +qV++WF N R +
  XP_010905861.1 382 FEHflHPYPTDTDKQMLSKQTGLTRNQVSNWFINARVR 419
                     554459******************************88 PP
2BELL92.44.5e-30250319372
            BELL   3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                     +e q kk++L+s+l+e+++rY+qy++q+q+vi sFe vagl +a+pY+s+Al+a+S hFr L+ +i++q+
  XP_010905861.1 250 REQQWKKTRLISMLDEIYRRYRQYYQQVQAVITSFESVAGLSTAAPYASMALNAMSGHFRRLRVMISNQL 319
                     7899***************************************************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005748.7E-33186317IPR006563POX domain
PfamPF075262.9E-33191316IPR006563POX domain
CDDcd000861.48E-13363424No hitNo description
SMARTSM003897.7E-11363427IPR001356Homeobox domain
PROSITE profilePS5007111.839364423IPR001356Homeobox domain
SuperFamilySSF466894.19E-17365430IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.2E-28366428IPR009057Homeodomain-like
PfamPF059201.4E-18380419IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 587 aa     Download sequence    Send to blast
MVVISNNNHN NKKKKTKKRV WRSRGRAEAK KMSSAGKRFV VGVGGGGEGQ LQQQHPMYHV  60
PQHSRREKLR SPSEDSPPPI SLPSLHDPST AWPLRAADTF TSYPPVSSSS SSSTCYSQNP  120
NYSIASSTQL SGHHRTLSLP IHQHQHHHHH HQISNQGFSL SLSSSPSNPP PPARHQFGVG  180
PLGPFTGYAT VLNRSSFLEP ARQLLEEICD FGRRAVTAAG GSSGGDMLLD DVPPEPSPMD  240
HRMDGRFSAR EQQWKKTRLI SMLDEIYRRY RQYYQQVQAV ITSFESVAGL STAAPYASMA  300
LNAMSGHFRR LRVMISNQLH HTNKVLGKGL SREGGPSSGL INNGACLQQA VNNSGTFGQL  360
HIWRPQRGLP ESAVAVLRAW LFEHFLHPYP TDTDKQMLSK QTGLTRNQVS NWFINARVRL  420
WKPMVEEMHS LEKQQLHKVS ASDKSRVTDE QSQLPSTSTA SPSNSRPDQR ANTQKNPHPT  480
TKCIQDDLTR IPDHTQEPFN IVCDVLPGYQ HLGFGVDVAA GGNSGVSLTL GLHQTNGVCL  540
VEPLPLNVAH CFSLEECNDA YVMGTFNGQE QQFGKNLGVQ FVHDFVG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A6e-16369427563Homeobox protein Meis2
3k2a_B6e-16369427563Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010905861.10.0BEL1-like homeodomain protein 9
TrEMBLA0A2H3ZCC40.0A0A2H3ZCC4_PHODC; BEL1-like homeodomain protein 9
STRINGXP_008811362.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25283881
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02030.13e-74TALE family protein