PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010905400.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family TALE
Protein Properties Length: 561aa    MW: 62417.7 Da    PI: 7.4197
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010905400.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox32.21.9e-103563931954
                     HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     Fe   ++yp+ ++++ LAk++gLt +qV++WF N R +
  XP_010905400.1 356 FEHflHPYPTDTDKQMLAKQTGLTRNQVSNWFINARVR 393
                     554458******************************88 PP
2BELL96.72e-31223292372
            BELL   3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                     +e q kk++Lls+l+eV++rYkqy++q+q+vi sFe v g  +a+pY+ +Alka+S+hFr L+++i++q+
  XP_010905400.1 223 TEQQWKKTRLLSMLDEVYERYKQYHHQVQAVITSFESVPGFSTAAPYAFMALKAMSKHFRQLRNMISNQL 292
                     5889***************************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.6E-37157290IPR006563POX domain
PfamPF075266.0E-36162289IPR006563POX domain
CDDcd000865.19E-13337398No hitNo description
SMARTSM003895.7E-11337401IPR001356Homeobox domain
SuperFamilySSF466892.48E-17339404IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.3E-28340401IPR009057Homeodomain-like
PfamPF059205.2E-19354393IPR008422Homeobox KN domain
PROSITE profilePS5007112.147356397IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010051Biological Processxylem and phloem pattern formation
GO:0010076Biological Processmaintenance of floral meristem identity
GO:0010077Biological Processmaintenance of inflorescence meristem identity
GO:0010089Biological Processxylem development
GO:0010154Biological Processfruit development
GO:0010223Biological Processsecondary shoot formation
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0048457Biological Processfloral whorl morphogenesis
GO:0048645Biological Processorgan formation
GO:0080006Biological Processinternode patterning
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 561 aa     Download sequence    Send to blast
MSSAAERFVV GGGEEQLFQQ HPVYHVPQHS RREKLRFPPE DAPSPTSLVL LHDANIASPL  60
YPTNTSFLPA FSSDSSPSSF TYYSQDYNHH IASSTQVSSH TTTLSLPTHH HHQISSQGFS  120
LSLSSSPSKP PPPPRHHAGV GINHGVPRSP APLGPFTGYA VVLNRSRFLE PARQLLEEIC  180
GAGRRAATAA AGSSADDMLL DSDPPEPSPM DHRMEVNDRI SGTEQQWKKT RLLSMLDEVY  240
ERYKQYHHQV QAVITSFESV PGFSTAAPYA FMALKAMSKH FRQLRNMISN QLHHTNKVLG  300
KEGLSSIETP SYGLIDNGVC IQRMVNNSGT FSQPHVWRPQ RGLPECAVAV LRAWLFEHFL  360
HPYPTDTDKQ MLAKQTGLTR NQVSNWFINA RVRLWKPMVE EIHSLETQQL HKVSAGDKSC  420
ETDGQTQLQS ASTAASHDSQ LPQSSNSQKN QHLTTKYIQH DHTQTPNRTQ EQFSFVYDVL  480
PGHQHIGVGT NVAAGGNSGV SLSLGLHQTN RVCWQEPLPL NVVRCFGLDE WNDAYVMGAF  540
DGQYRQFGKN ISGQFLHDFV G
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A1e-16343401563Homeobox protein Meis2
3k2a_B1e-16343401563Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010905400.10.0BEL1-like homeodomain protein 9
TrEMBLA0A2H3ZBW10.0A0A2H3ZBW1_PHODC; BEL1-like homeodomain protein 9
STRINGXP_008811511.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25283881
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02030.19e-75TALE family protein