PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010904889.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | VOZ | ||||||||
Protein Properties | Length: 531aa MW: 59147.8 Da PI: 5.6111 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 444.1 | 1.7e-136 | 223 | 439 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaael 95 pppsafl+pkcalwdc+rpa+gsew+qdycssfhatla+neg+pg+tpvlrp+gidlkdg+lfaal+ak+qgk+vgipecegaatakspwna+el XP_010904889.1 223 PPPSAFLRPKCALWDCPRPARGSEWYQDYCSSFHATLAYNEGPPGMTPVLRPGGIDLKDGPLFAALTAKTQGKNVGIPECEGAATAKSPWNAPEL 317 89********************************************************************************************* PP VOZ 96 fdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklv 190 fdl +l+ge++rewlffdkprrafesgnrkqrslpdy+grgwhesrkqvmkefgglkrsyymdpqp+s++ewhlyeyein++da+alyrlelklv XP_010904889.1 318 FDLLVLDGESLREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMKEFGGLKRSYYMDPQPLSHYEWHLYEYEINNCDACALYRLELKLV 412 *********************************************************************************************** PP VOZ 191 dekksakgkvskdsladlqkklgrlta 217 d kksakgkv++dsl dlq+++grl+a XP_010904889.1 413 DPKKSAKGKVTTDSLLDLQQQMGRLNA 439 ************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 531 aa Download sequence Send to blast |
MRKGSKSDGC RSAAHRLLKD TAKNRVDDLQ GMLADAQAAR KESRAADAAV LEEQVHQMLR 60 EWKAELDEAS PASSFPGHSH GSSDLSSYIR RMLQLNEEED DATSKLADLP HGANLKPEPL 120 EQLEPDAGGL HGGGPAAFLD EFFVSQEPPD YGFLGAERYK SSLLTGVHHA ASNYLEGNTD 180 FDYQQFTVHQ ELQHNVYIGF EASRQNGGDV VPLISEFIPA ICPPPSAFLR PKCALWDCPR 240 PARGSEWYQD YCSSFHATLA YNEGPPGMTP VLRPGGIDLK DGPLFAALTA KTQGKNVGIP 300 ECEGAATAKS PWNAPELFDL LVLDGESLRE WLFFDKPRRA FESGNRKQRS LPDYNGRGWH 360 ESRKQVMKEF GGLKRSYYMD PQPLSHYEWH LYEYEINNCD ACALYRLELK LVDPKKSAKG 420 KVTTDSLLDL QQQMGRLNAE NPMDNKRYIK GRVKLNHKDG AENAYSASNV VNEREHSQNA 480 YSASNLVNQR ECGQNAYSAL DQKGPIDENL GYGPSLPYAY SVDSLNNYYG T |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010904889.1 | 0.0 | transcription factor VOZ1 | ||||
Swissprot | Q9SGQ0 | 0.0 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | A0A2H3XIZ0 | 0.0 | A0A2H3XIZ0_PHODC; transcription factor VOZ1-like isoform X1 | ||||
STRING | XP_008784453.1 | 0.0 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2343 | 38 | 88 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 0.0 | vascular plant one zinc finger protein |
Publications ? help Back to Top | |||
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