PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.L02867.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 126aa MW: 14374.5 Da PI: 9.1026 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 64.1 | 4.1e-20 | 5 | 109 | 1 | 112 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp G+rF P+de+ +++ L++kv+g+ + e+i+e+d+y+ ePw++ k+ e+++y F+k + k+ +r +r++ sgyW+ + +v+ Eucgr.L02867.1.p 5 LPIGYRFCPSDEQAISYCLAPKVKGEVVFP-EFIHEFDVYEKEPWKFFD--KNAEESLYVFTKLKMKK---SRVERTAGSGYWRGAQS-SDVK 90 699**********************99555.79**************62..3456789****998875...69***********7654.6777 PP NAM 94 skkgelvglkktLvfykgr 112 + +++++glkk L f ++ Eucgr.L02867.1.p 91 DCHNNVIGLKKHLNFKVKD 109 77899**********8433 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 9.42E-22 | 4 | 113 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 23.071 | 5 | 125 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.7E-13 | 6 | 108 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 126 aa Download sequence Send to blast |
MADTLPIGYR FCPSDEQAIS YCLAPKVKGE VVFPEFIHEF DVYEKEPWKF FDKNAEESLY 60 VFTKLKMKKS RVERTAGSGY WRGAQSSDVK DCHNNVIGLK KHLNFKVKDG SSSIAKTPRR 120 ILDYA* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.L02867.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010042159.1 | 3e-90 | PREDICTED: NAC domain-containing protein 83-like | ||||
TrEMBL | A0A059BX48 | 2e-79 | A0A059BX48_EUCGR; Uncharacterized protein | ||||
STRING | XP_010042159.1 | 1e-89 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM13343 | 7 | 27 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15500.1 | 3e-13 | NAC domain containing protein 3 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.L02867.1.p |