PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.L02501.1.p | ||||||||
Common Name | EUGRSUZ_L02501 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 161aa MW: 17919.9 Da PI: 4.3129 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 36.9 | 1.1e-11 | 5 | 37 | 96 | 128 |
NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++e +g+kktLvfy+gr pkg++t+Wv hey+l Eucgr.L02501.1.p 5 TDEPIGIKKTLVFYTGRMPKGKRTNWVSHEYHL 37 56789***************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 18.984 | 1 | 60 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 4.45E-12 | 5 | 60 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.7E-4 | 9 | 37 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence Send to blast |
MSEDTDEPIG IKKTLVFYTG RMPKGKRTNW VSHEYHLNPK CLGQNENEML PYVACRIKNK 60 KEKKLMMGHA PTVSPEVYSS SLHAYTSNAS ETPVNQEGDY SSFCISPNDE VADDQEAVDA 120 QPEISVGELM ESLPPLQPLD DILSDCNTTL TYYPQAGTEE G |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.L02501.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010041775.1 | 1e-117 | PREDICTED: protein NTM1-like 9 | ||||
TrEMBL | A0A058ZRM7 | 1e-117 | A0A058ZRM7_EUCGR; Uncharacterized protein (Fragment) | ||||
STRING | XP_010041775.1 | 1e-117 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM35223 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.2 | 1e-14 | NAC transcription factor-like 9 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.L02501.1.p |