PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.L02499.1.p | ||||||||
Common Name | EUGRSUZ_L02499 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 131aa MW: 15262.6 Da PI: 10.5839 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 67.4 | 4e-21 | 11 | 112 | 27 | 121 |
NAM 27 kleleevikevdiykvePwdLp.k.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgr 112 + ++e++i+evd++++ PwdLp k ++k++ +ew+ Fs+ ++ky+++k ++r+ + g Wk tgk +++ ++ ++++ glkk+Lvf k + Eucgr.L02499.1.p 11 E-TVEQIIPEVDVHQLPPWDLPgKinelsRIKSDGDEWFLFSRLQNKYPQSKWARRTNDYGSWKPTGKPHKIRTQdRKNTLGLKKILVFKKCQ 102 3.34578***************54788887778899*********************9**************99977888**********886 PP NAM 113 apk.gektdW 121 +pk ++ +W Eucgr.L02499.1.p 103 SPKkAHIPNW 112 6650445666 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 21.109 | 1 | 130 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 5.49E-20 | 7 | 113 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.3E-5 | 31 | 105 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 131 aa Download sequence Send to blast |
MDRTLKTLGN ETVEQIIPEV DVHQLPPWDL PGKINELSRI KSDGDEWFLF SRLQNKYPQS 60 KWARRTNDYG SWKPTGKPHK IRTQDRKNTL GLKKILVFKK CQSPKKAHIP NWYCMNTVSS 120 MIRVTSFFTT * |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.L02499.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010064391.1 | 5e-64 | PREDICTED: protein NTM1-like 9 | ||||
Refseq | XP_010064501.1 | 5e-64 | PREDICTED: protein NTM1-like 9 | ||||
Refseq | XP_018725712.1 | 5e-64 | PREDICTED: protein NTM1-like 9 | ||||
TrEMBL | A0A058ZQP5 | 2e-92 | A0A058ZQP5_EUCGR; Uncharacterized protein | ||||
STRING | XP_010064391.1 | 2e-63 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33060.2 | 9e-20 | NAC 014 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.L02499.1.p |