PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Eucgr.L02201.1.p | ||||||||
Common Name | EUGRSUZ_L02201, LOC104430414 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 271aa MW: 30832.2 Da PI: 4.7787 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 83.5 | 4.1e-26 | 9 | 133 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 p+G+rF+Pt++elv ++L+kk++g+ ++ vi+e++iy++eP +L + ++ ++ +e++fF++r +k r+t g+Wk+t + Eucgr.L02201.1.p 9 PVGLRFKPTEDELVGHHLTKKLRGEMETI-CVIPELHIYNWEPPELFArynelsSIPSDGSECFFFCPRGRK--------RKTPCGFWKETST 92 89**********************99777.78**************743555555555888*******9885........77999******** PP NAM 89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +++ + e++gl+++Lv+++gr++++++t+ mh y+l Eucgr.L02201.1.p 93 KRVIKAPdSAEEMGLRRSLVYHEGRQRNAHRTNLGMHIYNL 133 999999867778*************************9987 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 7.45E-31 | 5 | 155 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 30.867 | 8 | 156 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.3E-17 | 9 | 133 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 271 aa Download sequence Send to blast |
MAESMEAWPV GLRFKPTEDE LVGHHLTKKL RGEMETICVI PELHIYNWEP PELFARYNEL 60 SSIPSDGSEC FFFCPRGRKR KTPCGFWKET STKRVIKAPD SAEEMGLRRS LVYHEGRQRN 120 AHRTNLGMHI YNLNSNVSDS EILDPTALVL CHIKNRKKEK AKPETPSTST ELSGPSNLND 180 SQIEETQDMS EQTSPEVTVD LPPNEMSNFN LPDRNLPTPD QQPHTTEEQH LSHDNHEHDD 240 EPGNGHCFMP YSPSDCIDLA DLFNFDESTE * |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-15 | 9 | 162 | 16 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Eucgr.L02201.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_010041450.1 | 0.0 | PREDICTED: NAC domain-containing protein 14 | ||||
TrEMBL | A0A058ZRC6 | 0.0 | A0A058ZRC6_EUCGR; Uncharacterized protein | ||||
STRING | XP_010041450.1 | 0.0 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G33060.1 | 5e-30 | NAC 014 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Eucgr.L02201.1.p |
Entrez Gene | 104430414 |