PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.L01925.1.p | ||||||||
Common Name | EUGRSUZ_L01925 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 294aa MW: 32878 Da PI: 4.7985 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 111.1 | 1.3e-34 | 5 | 138 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatg 87 p+G+rF+Pt++elv+++L+ k++gk + i+e+ iy++eP dL ++ ++ +e++fF++ k ++++r+n +t+ g+Wk t Eucgr.L01925.1.p 5 PVGLRFEPTEDELVDHHLRGKLKGKLEAF-CLIPELYIYSCEPPDLFIsynelsAIPSDGRECFFFCPCGDKIPNNRRSNNrMTELGFWKDTC 96 89*********************998555.78**************633555655666899*************98776544*********** PP NAM 88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 k++ + s +g+++g++k+Lv+y+gr+pkg+ktd vmhey+l Eucgr.L01925.1.p 97 KKRVIRSLvTGKQIGIRKILVYYEGRQPKGRKTDVVMHEYHL 138 *99998878999*****************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.45E-35 | 3 | 159 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 35.08 | 4 | 161 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.6E-19 | 5 | 138 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence Send to blast |
MAAWPVGLRF EPTEDELVDH HLRGKLKGKL EAFCLIPELY IYSCEPPDLF ISYNELSAIP 60 SDGRECFFFC PCGDKIPNNR RSNNRMTELG FWKDTCKKRV IRSLVTGKQI GIRKILVYYE 120 GRQPKGRKTD VVMHEYHLNS SVSDSKISGQ MAFVLCHIID RKCKKARSAK VCASASSSTS 180 STPNDSGNGR SDEVSTEASG EVTIETQNQN EILISSMPDS NGPIIPQQDQ MHEEQSPLYD 240 GCPFIDGHSD ELYDLPYSPS NGMEILDLWN VPTDELVCQS FLPGEEYDGL TFT* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 5e-22 | 5 | 162 | 16 | 169 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.L01925.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010041186.1 | 0.0 | PREDICTED: protein NTM1-like 9 | ||||
TrEMBL | A0A058ZRY5 | 0.0 | A0A058ZRY5_EUCGR; Uncharacterized protein | ||||
STRING | XP_010041186.1 | 0.0 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.1 | 1e-35 | NAC transcription factor-like 9 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.L01925.1.p |