PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.L01924.2.p | ||||||||
Common Name | EUGRSUZ_L01924 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 213aa MW: 23852.4 Da PI: 8.8717 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 109.3 | 4.4e-34 | 5 | 138 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrk.nratksgyWkatg 87 p+G+rF+Pt++el++++L+ k++gk i+e+ iy++eP dL + ++ +e++fF++ k ++++r+ nr+t+ gyWk t Eucgr.L01924.2.p 5 PVGLRFEPTEDELIDHHLRGKLKGKLEAY-CLIPELYIYSCEPPDLFIsynelsDIPSDGRECFFFCPCGDKIPSNHRSnNRMTELGYWKDTC 96 89*********************998555.67**************633455555666899***********9987776156*********** PP NAM 88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 k++ + s +g+++g++k+Lv+y+gr+pkg+ktd vmhey l Eucgr.L01924.2.p 97 KKRVIRSLvTGKQIGIRKILVYYEGRQPKGRKTDVVMHEYLL 138 *99998878999****************************76 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.02E-34 | 2 | 159 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 34.162 | 4 | 161 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.9E-19 | 5 | 137 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence Send to blast |
MASWPVGLRF EPTEDELIDH HLRGKLKGKL EAYCLIPELY IYSCEPPDLF ISYNELSDIP 60 SDGRECFFFC PCGDKIPSNH RSNNRMTELG YWKDTCKKRV IRSLVTGKQI GIRKILVYYE 120 GRQPKGRKTD VVMHEYLLNS SVSDSKISGP IAFVLCHIID RKRKKVRSAK ASTLANSSAG 180 SIPNDSGNGQ AHEISAQVPK NCSGLTYSSM IY* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-21 | 5 | 162 | 16 | 169 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 160 | 164 | RKRKK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.L01924.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018722529.1 | 1e-145 | PREDICTED: protein NTM1-like 9 | ||||
TrEMBL | A0A058ZS05 | 1e-156 | A0A058ZS05_EUCGR; Uncharacterized protein | ||||
STRING | XP_010065768.1 | 1e-142 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33060.1 | 7e-36 | NAC 014 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.L01924.2.p |