PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.L01924.1.p | ||||||||
Common Name | EUGRSUZ_L01924 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 283aa MW: 31668.8 Da PI: 6.0995 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 108.3 | 9.4e-34 | 5 | 138 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrk.nratksgyWkatg 87 p+G+rF+Pt++el++++L+ k++gk i+e+ iy++eP dL + ++ +e++fF++ k ++++r+ nr+t+ gyWk t Eucgr.L01924.1.p 5 PVGLRFEPTEDELIDHHLRGKLKGKLEAY-CLIPELYIYSCEPPDLFIsynelsDIPSDGRECFFFCPCGDKIPSNHRSnNRMTELGYWKDTC 96 89*********************998555.67**************633455555666899***********9987776156*********** PP NAM 88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 k++ + s +g+++g++k+Lv+y+gr+pkg+ktd vmhey l Eucgr.L01924.1.p 97 KKRVIRSLvTGKQIGIRKILVYYEGRQPKGRKTDVVMHEYLL 138 *99998878999****************************76 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.44E-33 | 3 | 159 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 34.162 | 4 | 161 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.9E-18 | 5 | 137 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence Send to blast |
MASWPVGLRF EPTEDELIDH HLRGKLKGKL EAYCLIPELY IYSCEPPDLF ISYNELSDIP 60 SDGRECFFFC PCGDKIPSNH RSNNRMTELG YWKDTCKKRV IRSLVTGKQI GIRKILVYYE 120 GRQPKGRKTD VVMHEYLLNS SVSDSKISGP IAFVLCHIID RKRKKVRSAK ASTLANSSAG 180 SIPNDSGNGQ AHEISAQGSE EKTIETQNQI EISICRMPDG PDGRRANLLY NGCPFIDEYS 240 DQLHDTPYSP SNGMEILDMW NVPTDGPECQ SIFHGEAFDG LA* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 9e-21 | 5 | 162 | 16 | 169 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 160 | 164 | RKRKK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.L01924.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010065768.1 | 0.0 | PREDICTED: protein NTM1-like 9 | ||||
TrEMBL | A0A058ZT75 | 0.0 | A0A058ZT75_EUCGR; Uncharacterized protein | ||||
STRING | XP_010065768.1 | 0.0 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33060.1 | 6e-35 | NAC 014 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.L01924.1.p |