PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.L01867.1.p | ||||||||
Common Name | EUGRSUZ_L01867 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 152aa MW: 17866.5 Da PI: 9.8516 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 119.8 | 2.6e-37 | 7 | 137 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.......kvkaeekewyfFskrdkkyatgkrknratksgyWka 85 lp+G rFhPt ee v++yLk++++g + +i++vdi+k++P++Lp k + + + +ew+fFs++ ++ +r+t sgyWk+ Eucgr.L01867.1.p 7 LPVGHRFHPTGEEFVNYYLKRRIQGIVDHP-CIIPDVDICKWDPRELPdKfhgesiiHRDDQVREWWFFSPHTP-----QQVKRSTPSGYWKK 93 799*********************998555.58***************5467766432233666*******966.....4789********** PP NAM 86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 tg d++v+++ +g+ +g+kk Lvf+ g+ +kg+kt+Wv hey+l Eucgr.L01867.1.p 94 TGIDRKVKARdNGRIIGTKKFLVFHIGQGKKGVKTNWVFHEYHL 137 ********9988899***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.01E-40 | 3 | 144 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 38.411 | 7 | 151 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.6E-22 | 8 | 137 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 152 aa Download sequence Send to blast |
MINLQHLPVG HRFHPTGEEF VNYYLKRRIQ GIVDHPCIIP DVDICKWDPR ELPDKFHGES 60 IIHRDDQVRE WWFFSPHTPQ QVKRSTPSGY WKKTGIDRKV KARDNGRIIG TKKFLVFHIG 120 QGKKGVKTNW VFHEYHLPTD DVLNLTLLYS I* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 6e-27 | 6 | 137 | 14 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.L01867.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018722506.1 | 1e-103 | PREDICTED: NAC domain-containing protein 62 | ||||
TrEMBL | A0A058ZU93 | 1e-108 | A0A058ZU93_EUCGR; Uncharacterized protein | ||||
STRING | XP_010041129.1 | 1e-103 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM20677 | 2 | 6 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49530.1 | 1e-36 | NAC domain containing protein 62 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.L01867.1.p |