PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.L01801.1.p | ||||||||
Common Name | EUGRSUZ_L01801 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | B3 | ||||||||
Protein Properties | Length: 143aa MW: 16347.9 Da PI: 9.0786 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 34.1 | 4.9e-11 | 31 | 127 | 2 | 85 |
EEE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTH.HHHHHHHT--TT-EEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesg.rsWevkliyrkksgryvltkGW.keFvkangLkegDfvv 81 +k lt+sd + ++rl + ++f+++h + ++ ++ +++++d + + + + ++ +sg+yvl++GW keF+k gL +gD + Eucgr.L01801.1.p 31 KKRLTQSDLGHLSRLLIGRDFVKSHflrwmseetvrQVESGKGADVIVRDVDTcSENGLVFVFWASSGSYVLKGGWiKEFAKRRGLAVGDEIG 123 5889************************99888887555558889999998885333444455*************899***********888 PP EEE- CS B3 82 Fkld 85 ++ d Eucgr.L01801.1.p 124 LYWD 127 8844 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 1.28E-14 | 29 | 135 | IPR015300 | DNA-binding pseudobarrel domain |
SMART | SM01019 | 0.0053 | 30 | 141 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 2.05E-15 | 30 | 138 | No hit | No description |
Gene3D | G3DSA:2.40.330.10 | 3.0E-14 | 31 | 137 | IPR015300 | DNA-binding pseudobarrel domain |
Pfam | PF02362 | 4.2E-8 | 32 | 127 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence Send to blast |
MKGSEVLLLQ DWWWLVISTE LTLLFDPYKI KKRLTQSDLG HLSRLLIGRD FVKSHFLRWM 60 SEETVRQVES GKGADVIVRD VDTCSENGLV FVFWASSGSY VLKGGWIKEF AKRRGLAVGD 120 EIGLYWDPIT SKFHFSLLHK AN* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.L01801.1.p |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010041071.2 | 1e-79 | PREDICTED: uncharacterized protein LOC104429979 | ||||
Refseq | XP_010058716.1 | 1e-79 | PREDICTED: uncharacterized protein LOC104446575 | ||||
Refseq | XP_018729963.1 | 4e-80 | PREDICTED: B3 domain-containing protein At2g33720-like | ||||
TrEMBL | A0A058ZUD8 | 4e-98 | A0A058ZUD8_EUCGR; Uncharacterized protein | ||||
STRING | XP_010041071.1 | 4e-79 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM456 | 9 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33720.1 | 7e-28 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.L01801.1.p |