PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Eucgr.L01064.1.p | ||||||||
Common Name | EUGRSUZ_L01064 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
|
||||||||
Family | Nin-like | ||||||||
Protein Properties | Length: 188aa MW: 21832.1 Da PI: 8.7691 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 63 | 5.1e-20 | 95 | 141 | 4 | 50 |
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50 +++l d+ yF+lpi++A L +c+T++K+iCR+ G+ RWP+Rki+ Eucgr.L01064.1.p 95 KMTLADVGGYFHLPIEKAFERLHLCPTIVKKICRKGGVGRWPYRKIQ 141 7999******************************************7 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 15.255 | 83 | 163 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 2.6E-17 | 95 | 141 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 188 aa Download sequence Send to blast |
MVSHAILDTQ HNPGAVPSNG EDRYQMFDFC KKSIQNVKDF LQQYCEGRRL AGYIMYQDPL 60 AMFYEAVCVG IDFNGNVNAD YFQLPLPPTR ERAGKMTLAD VGGYFHLPIE KAFERLHLCP 120 TIVKKICRKG GVGRWPYRKI QCIERKILEL REQLKREDEP KRSRTQAEID EWQRNLDKIR 180 YGVARTD* |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Eucgr.L01064.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_018718902.1 | 1e-115 | PREDICTED: protein RKD5 isoform X2 | ||||
TrEMBL | A0A058ZV01 | 1e-138 | A0A058ZV01_EUCGR; Uncharacterized protein | ||||
STRING | XP_010024146.1 | 1e-131 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM4076 | 23 | 42 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G24020.1 | 1e-09 | NIN like protein 7 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Eucgr.L01064.1.p |