PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.K03127.1.p
Common NameEUGRSUZ_K03127
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family GRAS
Protein Properties Length: 628aa    MW: 71950.8 Da    PI: 7.9351
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.K03127.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS354.71.4e-1082506252374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                       ++lL++cA+av+s+d++ a+alL++++++asp g+ +qRla+yf++ L+ rla+++s++ + ++ ++t+    ++ l+a++l+  ++P+++ s
  Eucgr.K03127.1.p 250 RTLLIQCAQAVASNDHKSANALLNEIRKHASPFGNGTQRLAHYFANSLEGRLAGTGSQIWRGIANRKTT---AADMLNAHHLYLAACPFHRYS 339
                       689************************************************************999999...9******************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                         + N ++l+ v+ + r+HiiDf+i +G+QWp+L+q+L++Rp    +lRiTg++ p++g   +e+++etg+rLa++Ae+++vpfe+n+ +akr
  Eucgr.K03127.1.p 340 IAMSNMTVLDRVADKMRIHIIDFGIHYGFQWPSLIQSLSQRPCL-TKLRITGIELPQPGfrPAERVKETGQRLANYAESFNVPFEYNA-IAKR 430
                       *****************************************965.79***********9*****************************.7*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsles......erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsle 272
                       +e +eleeL+++++E++++n++++ ++l+de+ + es       rd vL+l+++ +P+++++   +a+hn++ F++rf ea +++s+lfd+l+
  Eucgr.K03127.1.p 431 WELIELEELKIDRDEVTIINCMFRFKNLFDETITEESsrdiecSRDIVLNLIRRAQPDLFIHGVINANHNAPFFVTRFREASHHFSSLFDMLD 523
                       *****************************99988888777777899*********************************************** PP

              GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdr 365
                       + +pre++er+ +E+e+lgr++ n +aceg er+er e++++W+ r ++aGF +vpls + a+ +   ++ ++ + + v+e  ++l+lgWk+r
  Eucgr.K03127.1.p 524 TIIPRENQERMLIEKEMLGRQALNTIACEGWERVERPESYKQWQLRNMRAGFVQVPLSRRLAQFVFNEMASHYHKDFVVDEVGKWLLLGWKGR 616
                       ***********************************************************99988887777777677***************** PP

              GRAS 366 pLvsvSaWr 374
                        L+++S W+
  Eucgr.K03127.1.p 617 FLFAFSTWK 625
                       ********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098560.963223605IPR005202Transcription factor GRAS
PfamPF035144.9E-106250625IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 628 aa     Download sequence    Send to blast
MEEDIEEKTC MLQDSLDLLS AEKSFYEVLG KKYPPSPEPN RTNCITFNDK HTNDSLLDST  60
RYTSTIGSRK NGYYANIGWV QNQSNYGTMS FEKDISPVAF QPNRQGNAQR LDLCGESQLI  120
RQFRMGVEES SKFLPNQAST ELLHQEPNGK IDKADCFGAL KRKESLHREE GNMEERSSKQ  180
AFVYEESVLR SDAFDVVLLS GQGEGLARLM NLCASLKHRV NEIAHEIEEP KGGRGRVKKK  240
KGKVEVVDVR TLLIQCAQAV ASNDHKSANA LLNEIRKHAS PFGNGTQRLA HYFANSLEGR  300
LAGTGSQIWR GIANRKTTAA DMLNAHHLYL AACPFHRYSI AMSNMTVLDR VADKMRIHII  360
DFGIHYGFQW PSLIQSLSQR PCLTKLRITG IELPQPGFRP AERVKETGQR LANYAESFNV  420
PFEYNAIAKR WELIELEELK IDRDEVTIIN CMFRFKNLFD ETITEESSRD IECSRDIVLN  480
LIRRAQPDLF IHGVINANHN APFFVTRFRE ASHHFSSLFD MLDTIIPREN QERMLIEKEM  540
LGRQALNTIA CEGWERVERP ESYKQWQLRN MRAGFVQVPL SRRLAQFVFN EMASHYHKDF  600
VVDEVGKWLL LGWKGRFLFA FSTWKPA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5hyz_A6e-442536258375GRAS family transcription factor containing protein, expressed
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.K03127.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010037827.10.0PREDICTED: scarecrow-like protein 9
TrEMBLA0A059A7G00.0A0A059A7G0_EUCGR; Uncharacterized protein
STRINGXP_010037827.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM35827189
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein