PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.K03115.1.p | ||||||||
Common Name | EUGRSUZ_K03115, LOC104426457 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | WRKY | ||||||||
Protein Properties | Length: 306aa MW: 33648.5 Da PI: 5.3768 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.9 | 1.5e-31 | 111 | 167 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 dDgy+WrKYGqK++k+s +prsYY+Ct ++C++kk+vers +dp+++++tYeg H h Eucgr.K03115.1.p 111 DDGYKWRKYGQKSIKNSANPRSYYKCTNPRCNAKKQVERSGDDPDTLIVTYEGLHLH 167 8******************************************************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 26.119 | 105 | 170 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 1.5E-28 | 107 | 167 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.88E-26 | 108 | 167 | IPR003657 | WRKY domain |
SMART | SM00774 | 5.1E-35 | 110 | 169 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.2E-25 | 111 | 167 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 306 aa Download sequence Send to blast |
MMEEDNGFGD EEELVRELLN NESPLFMTMD PSTETSNQEA AIKRLMSNVY SGPTIQDIES 60 ALFLSAHPMD IQPPQDYSPA RSQTSSFQRG LDKIDHKYTL KIKSCGNGTT DDGYKWRKYG 120 QKSIKNSANP RSYYKCTNPR CNAKKQVERS GDDPDTLIVT YEGLHLHFAY PYFPLGPVHQ 180 LDPPVKKPKK AALSTDDQAQ DKPNEVLEAE GSTDAFKTGL AQTAMEGCPL GLTQEAMGHQ 240 GLGLLEDVVP FMIRNPTMKN VSDHSSSSSS SSYNHLSPPN SPSYQSCSPS YAPPYYGIGL 300 GSCIK* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 2e-19 | 111 | 167 | 18 | 74 | Probable WRKY transcription factor 4 |
2lex_A | 2e-19 | 111 | 167 | 18 | 74 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.K03115.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010037823.1 | 0.0 | PREDICTED: probable WRKY transcription factor 49 | ||||
TrEMBL | A0A059A8A0 | 0.0 | A0A059A8A0_EUCGR; Uncharacterized protein | ||||
STRING | XP_010037823.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM9405 | 26 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43290.1 | 3e-48 | WRKY DNA-binding protein 49 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.K03115.1.p |
Entrez Gene | 104426457 |