PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.K02453.1.p
Common NameEUGRSUZ_K02453, LOC104425964
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 547aa    MW: 59737.2 Da    PI: 6.8978
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.K02453.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.92.7e-30263322159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       ++Dg++WrKYGqK  kg+++pr+YYrCt a +Cpv+k+v+r+aed +++++tYeg+Hnh+
  Eucgr.K02453.1.p 263 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRKQVQRCAEDMSILVTTYEGTHNHP 322
                       58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.7E-31248324IPR003657WRKY domain
SuperFamilySSF1182902.75E-27256324IPR003657WRKY domain
PROSITE profilePS5081128.369258324IPR003657WRKY domain
SMARTSM007742.3E-36263323IPR003657WRKY domain
PfamPF031061.3E-26264322IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006952Biological Processdefense response
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 547 aa     Download sequence    Send to blast
MEDAFERSGH GGVDVVKEEK RVDDENSDHH DGGGQYSREV VLVQEVKNKM PPKESENSKP  60
SSPNQMISSP RRKEDQHQLE SARAEMSQVR EENQKLKMYL NQIMRDYRTL QMKFFDAVKQ  120
EDDNKKSANA TKGSCREIDQ ESDELVSLSL GRATSDSKKL SLEDKNKSLA QVKDNTNDHK  180
FEEGLGFGLD YKLELLTSGT TESLPNPSPD TSIEEAKEEA GETWPPGIVK KTMRTSCDDE  240
VSQQNPVKKA RVSVRARCDT PTMNDGCQWR KYGQKIAKGN PCPRAYYRCT VAPSCPVRKQ  300
VQRCAEDMSI LVTTYEGTHN HPLPMSATAM ASTTSAAAHM LLSGSSTSQN ISSHGSSSLT  360
MAPMAANLQG LSFYQSEASK ARSPFYLPTT SFASSSTPTI TLDLTSNPLS SSSSSSLFNR  420
FPLQYPSTRF SSTSLSFNNS FESSALPLPW GSSNGGLMNY NTSQLFNKNQ ALDLAKQAQE  480
SYHQSYTQKN MSSLPQQALP ESIAAATKAI TADPSFQSAL AAALKSIIGN GGGGNSNQGG  540
VDHFRN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-20250324174WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.K02453.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010037154.10.0PREDICTED: probable WRKY transcription factor 72
TrEMBLA0A059A3W50.0A0A059A3W5_EUCGR; Uncharacterized protein
STRINGXP_010037154.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM29592868
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.13e-72WRKY DNA-binding protein 72