PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Eucgr.K01706.1.p

Common Name

EUGRSUZ_K01706, LOC104425421

Organism

Eucalyptus grandis

Taxonomic ID

71139

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

bZIP

Protein Properties

Length: 335aa MW: 36259.1 Da PI: 9.5999

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Eucgr.K01706.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.2	4.9e-15	264	309	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 +r++r++kNRe+A rsR+RK+a+++eLe kv Le+eN++L+ +le Eucgr.K01706.1.p 264 RRQKRMIKNRESAARSRARKQAYTQELEIKVLRLEEENERLRRKLE 309 79****************************************9997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.8E-14	256	309	No hit	No description
SMART	SM00338	1.3E-13	260	332	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.691	262	309	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.1E-12	264	309	IPR004827	Basic-leucine zipper domain
CDD	cd14707	1.93E-25	264	318	No hit	No description
SuperFamily	SSF57959	4.19E-10	264	309	No hit	No description
PROSITE pattern	PS00036	0	267	282	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence Send to blast
MGSQVGGFGG GIGGETAGRP LSRQGSLYGL TLDEVQNQLG GMGKPLGSMN LDELLKSVWS 60 VEANQGLNMG AAEPESTQSG LFAPLQKQPS FTLSRALSKK TVDEVWKDIQ QGEIDDGSNK 120 SKKKKKDSGL GDQDAKPSLG EMTLEDFLHK AGVVAESPVI NKNGNHVVDV DSVTSGGPQS 180 AQWMHYQLPS VQPQQNVVPV FIPGHHVVQQ PVPIITSPFL DSAFGDAAQM TVSPSSLLCT 240 LSDTPTPGRK RVAPRDVVEK TVERRQKRMI KNRESAARSR ARKQAYTQEL EIKVLRLEEE 300 NERLRRKLEA EKVLPSAPPA EPKNQLRRTS SAPL*

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Eucgr.K01706.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010036426.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	3e-95	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A059A3R7	0.0	A0A059A3R7_EUCGR; Uncharacterized protein
STRING	XP_010036426.1	0.0	(Eucalyptus grandis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM1884	28	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	2e-82	ABA-responsive element binding protein 3

Link Out ? help Back to Top
Phytozome	Eucgr.K01706.1.p
Entrez Gene	104425421

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]