PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.K01251.2.p
Common NameEUGRSUZ_K01251
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family MYB_related
Protein Properties Length: 381aa    MW: 42611.8 Da    PI: 8.7135
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.K01251.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.85.1e-08255302448
                       S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                       WT  E  +lvd++ ++G g W+ I r +      Rt+ +++++w+++l
  Eucgr.K01251.2.p 255 WTLAEVTKLVDGISEYGAGKWTDIKRLFFatsAYRTPIDLRDKWRNLL 302
                       ********************************99************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.5E-11247305IPR009057Homeodomain-like
PROSITE profilePS5129413.87247306IPR017930Myb domain
SuperFamilySSF466899.72E-16249344IPR009057Homeodomain-like
SMARTSM007176.1E-7251304IPR001005SANT/Myb domain
CDDcd116605.59E-18253303No hitNo description
PfamPF139213.5E-6255305No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
MEVLDSMDGP PIACEDYLLD MDLAQEVSAL DVGLCDGLRL GNSSTDSHSP GYSGSSNGAI  60
EMSESSDGNN PELNCNDDSS QGRIGPEDSN CLSRDSVKVD QLQNSPDCVV SLLSSRNKNN  120
PAAESRLVAC LTQKRQRKPT RRYIEESANM KSSHLRPEQK PFAVDSKKHV IFRTPDQLHN  180
VESRELISVP VKDCPEETGI KTLPHPHLQG RRLKKRKPLL EDDSGEYSSA SESEDDFVER  240
RPKKGIDRRK HQRMWTLAEV TKLVDGISEY GAGKWTDIKR LFFATSAYRT PIDLRDKWRN  300
LLRASQALKS HKGEAETETE TNEKNAVRPL PKSLLHRVSE LATIHPYPRS YNSRSRPVPT  360
AKKGARLSSN GRNVRRRVCP *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1210216RRLKKRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.K01251.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018721186.10.0PREDICTED: uncharacterized protein LOC104425075 isoform X1
TrEMBLA0A059A0310.0A0A059A031_EUCGR; Uncharacterized protein
TrEMBLA0A059A1C80.0A0A059A1C8_EUCGR; Uncharacterized protein
STRINGXP_010035961.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.15e-23TRF-like 6