PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.K00321.1.p | ||||||||
Common Name | EUGRSUZ_K00321 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | ERF | ||||||||
Protein Properties | Length: 326aa MW: 35682.5 Da PI: 4.261 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.8 | 1.5e-19 | 89 | 138 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+W+AeIrdp r r +lg+++taeeAa +++a+ kl+g Eucgr.K00321.1.p 89 KFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYDTAEEAAMVYDNAAIKLRG 138 89*******.**********82....35*************************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 5.4E-30 | 88 | 146 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 9.81E-22 | 89 | 146 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 8.2E-13 | 89 | 138 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.79E-31 | 89 | 146 | No hit | No description |
PROSITE profile | PS51032 | 23.947 | 89 | 146 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.1E-38 | 89 | 152 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.4E-10 | 90 | 101 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.4E-10 | 112 | 128 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0042991 | Biological Process | transcription factor import into nucleus | ||||
GO:0048825 | Biological Process | cotyledon development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence Send to blast |
MDDCFFNPVK YTEHRTVTRK LTRAARKSFP PAPTRRYVHE ISVEPASRGG GALQAASISR 60 KRPSLADPQV PRRPLKAAAM EAATGSGRKF RGVRQRPWGK WAAEIRDPAR RVRLWLGTYD 120 TAEEAAMVYD NAAIKLRGPD ALTNFATPLK EAAVTDDVDA DIEEVAAEDN INTAACGYDS 180 GDDSRNLSSP TSVLHFRTQS GEEAEPAGPA PQVEPAEPVR EEPGTSKPAA EEEVQECQGE 240 TGEFAPLDLP FLDDFFNFDP PESTLFDETT IGTFSDRLLA EDFMSDIFVD RPEDFGSLSP 300 MDMCQADDYF QDIGDLFASD PLVAP* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 3e-20 | 86 | 150 | 2 | 65 | ATERF1 |
3gcc_A | 3e-20 | 86 | 150 | 2 | 65 | ATERF1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.K00321.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010035200.1 | 0.0 | PREDICTED: ethylene-responsive transcription factor CRF4 | ||||
TrEMBL | A0A058ZXH7 | 0.0 | A0A058ZXH7_EUCGR; Uncharacterized protein | ||||
STRING | XP_010035200.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM2229 | 25 | 76 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 3e-45 | cytokinin response factor 4 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.K00321.1.p |