PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.J00345.1.p | ||||||||
Common Name | EUGRSUZ_J00345 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | Nin-like | ||||||||
Protein Properties | Length: 192aa MW: 22171.4 Da PI: 8.7691 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 66.8 | 3.2e-21 | 99 | 145 | 4 | 50 |
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50 +++l d+ yF+lpi++A+ L +c+Tv+K+iCR+ G+ RWP+Rki+ Eucgr.J00345.1.p 99 KMTLADVGGYFHLPIEKASERLHLCPTVVKKICRKGGVGRWPYRKIQ 145 7999******************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 16.119 | 87 | 167 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 1.2E-18 | 99 | 145 | IPR003035 | RWP-RK domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0051302 | Biological Process | regulation of cell division |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence Send to blast |
MVSHAILDTQ HNPGAVPSNG EDRYQMFDFC KKSIQNVKDF LQQYCEGRRL AGYIMYQDPL 60 AMFYEAVCVG IDFNGNVNAD YFQLPLPPTV SVQRERAGKM TLADVGGYFH LPIEKASERL 120 HLCPTVVKKI CRKGGVGRWP YRKIQCIERK ILELREQLKR EDEPKRSRTQ AEIDEWQRNL 180 DKIRYGVART D* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.J00345.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018718902.1 | 1e-122 | PREDICTED: protein RKD5 isoform X2 | ||||
TrEMBL | A0A059AAH1 | 1e-142 | A0A059AAH1_EUCGR; Uncharacterized protein | ||||
STRING | XP_010024146.1 | 1e-135 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM4076 | 23 | 42 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24020.1 | 6e-10 | NIN like protein 7 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.J00345.1.p |