PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.I01494.1.p | ||||||||
Common Name | EUGRSUZ_I01494, LOC104419010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 302aa MW: 34718.6 Da PI: 8.3904 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 150.4 | 8.7e-47 | 13 | 139 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 pGfrFhPt+eel+++yL++ +++kkl++ +vi ++iy+++P++Lp +k +e+ewyfF++rd+k+ +g r+nr+tk+g+Wkatg+d++++s Eucgr.I01494.1.p 13 PGFRFHPTEEELLDFYLRNMISNKKLRF-DVIGFLNIYHYDPRELPGLAKIGEREWYFFVPRDRKHGSGGRPNRTTKHGFWKATGSDRKIVSL 104 9*************************99.99***************8888899*************************************998 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++ gl+ktLvfy+grap+g+ktdWvm+eyrl Eucgr.I01494.1.p 105 sdHKRVLGLRKTLVFYEGRAPRGTKTDWVMNEYRL 139 668888***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 54.057 | 11 | 156 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.29E-55 | 12 | 156 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.5E-25 | 13 | 139 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009965 | Biological Process | leaf morphogenesis | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0045792 | Biological Process | negative regulation of cell size | ||||
GO:0048281 | Biological Process | inflorescence morphogenesis | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 302 aa Download sequence Send to blast |
MEEPTPTPEL ELPGFRFHPT EEELLDFYLR NMISNKKLRF DVIGFLNIYH YDPRELPGLA 60 KIGEREWYFF VPRDRKHGSG GRPNRTTKHG FWKATGSDRK IVSLSDHKRV LGLRKTLVFY 120 EGRAPRGTKT DWVMNEYRLP DDSSPKEMVL CKIYRKATSL KVLEQRAAMG EGMNKAATAA 180 VAHLSPPSPF SPMETSSSFN TQQYDLMPSM RESKIVFKQE LLEEAEDEQE VQGFITSPPQ 240 DLFVNKVMTK GSSSSLQMPT GKEKLPELQL PKMPADWTQD NFWTQFNSPW LQNLNTPYLT 300 F* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 2e-44 | 1 | 159 | 6 | 168 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-44 | 1 | 159 | 6 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-44 | 1 | 159 | 6 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-44 | 1 | 159 | 6 | 168 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-44 | 1 | 159 | 9 | 171 | NAC domain-containing protein 19 |
3swm_B | 2e-44 | 1 | 159 | 9 | 171 | NAC domain-containing protein 19 |
3swm_C | 2e-44 | 1 | 159 | 9 | 171 | NAC domain-containing protein 19 |
3swm_D | 2e-44 | 1 | 159 | 9 | 171 | NAC domain-containing protein 19 |
3swp_A | 2e-44 | 1 | 159 | 9 | 171 | NAC domain-containing protein 19 |
3swp_B | 2e-44 | 1 | 159 | 9 | 171 | NAC domain-containing protein 19 |
3swp_C | 2e-44 | 1 | 159 | 9 | 171 | NAC domain-containing protein 19 |
3swp_D | 2e-44 | 1 | 159 | 9 | 171 | NAC domain-containing protein 19 |
4dul_A | 2e-44 | 1 | 159 | 6 | 168 | NAC domain-containing protein 19 |
4dul_B | 2e-44 | 1 | 159 | 6 | 168 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.I01494.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010028811.1 | 0.0 | PREDICTED: NAC transcription factor 29 | ||||
Swissprot | Q10S65 | 2e-94 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A059AQC5 | 0.0 | A0A059AQC5_EUCGR; Uncharacterized protein | ||||
STRING | XP_010028811.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3899 | 28 | 60 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 1e-102 | NAC domain containing protein 36 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.I01494.1.p |
Entrez Gene | 104419010 |
Publications ? help Back to Top | |||
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