PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.I00420.1.p
Common NameEUGRSUZ_I00420
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family EIL
Protein Properties Length: 513aa    MW: 57672.3 Da    PI: 4.9364
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.I00420.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3391.31.3e-119353542353
                       XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
              EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraW 94 
                       +l+krmwkd+m l+rlke++      +    g ++    +e++rrkkm+raQD+iLkYM+k+mevcna+GfvYgi+p+ gkpv+g+s+sLr+W
  Eucgr.I00420.1.p  35 DLQKRMWKDRMHLQRLKEKRDAAA--AA-GGGRHEPLAKEEASRRKKMARAQDSILKYMVKIMEVCNARGFVYGIVPKHGKPVTGSSESLREW 124
                       89****************999854..33.3678888899****************************************************** PP

                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT-- CS
              EIN3  95 WkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelgls 187
                       Wke v+fd+n+p ai++y     +l+++ +  +++ss+ h l +l+DTtlgS+Lsal+qhc ppqr+fp+ekg++pPWWPtG+elwwg++g++
  Eucgr.I00420.1.p 125 WKETVKFDQNAPLAIAEY--MSQVLDESGE--ADPSSYMHLLYDLPDTTLGSILSALIQHCAPPQRKFPMEKGLAPPWWPTGTELWWGNQGIA 213
                       ******************..4456664444..479********************************************************** PP

                       TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXX CS
              EIN3 188 kdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceq 280
                       ++qg ppykkphdlkkawkvsvL++vikhmsp+++++r+l+r sk+lqdkmsake++++++v+ qee+++           + ++ +++s +q
  Eucgr.I00420.1.p 214 HEQGLPPYKKPHDLKKAWKVSVLASVIKHMSPNLDQMRRLVRHSKSLQDKMSAKETAIWSKVVDQEEALLL----------QTQRCLKISPSQ 296
                       *******************************************************************9773..........356689999999 PP

                       XXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS
              EIN3 281 kedvegkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353
                       +e+ e+++e+              +  +krk   + ++ v +  + + cq++++++s+ + +f d+ns++++e
  Eucgr.I00420.1.p 297 EEREEENRETT------------WSSFEKRK--CVFHREVDEY-TLYACQNAECPQSQLSSGFIDRNSRTDHE 354
                       97666555555............44455565..3344444333.4699**********************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048733.2E-11535280No hitNo description
Gene3DG3DSA:1.10.3180.101.4E-63156287IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167684.84E-56159283IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 513 aa     Download sequence    Send to blast
MVEIIGEVME PWSPGGDPDR DEDDDPEEEE ISYHDLQKRM WKDRMHLQRL KEKRDAAAAA  60
GGGRHEPLAK EEASRRKKMA RAQDSILKYM VKIMEVCNAR GFVYGIVPKH GKPVTGSSES  120
LREWWKETVK FDQNAPLAIA EYMSQVLDES GEADPSSYMH LLYDLPDTTL GSILSALIQH  180
CAPPQRKFPM EKGLAPPWWP TGTELWWGNQ GIAHEQGLPP YKKPHDLKKA WKVSVLASVI  240
KHMSPNLDQM RRLVRHSKSL QDKMSAKETA IWSKVVDQEE ALLLQTQRCL KISPSQEERE  300
EENRETTWSS FEKRKCVFHR EVDEYTLYAC QNAECPQSQL SSGFIDRNSR TDHESQCVYG  360
AEKSEDDTSD GGSIKAESGT ELAEHESGPH SPHHTLMQSA MLNLDDWMSL GSHKADKEGG  420
VGGGDSHSSD VGQRGGAAMG DYHHDPMSYW RSTGGLEDLM PGNAFEMQQE DLNLNWNPSP  480
KETAMVAAVA LNDHADEQAS IWDLKYVEVD SD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A6e-521572821126Protein ETHYLENE INSENSITIVE 3
4zds_B6e-521572821126Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.I00420.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010030420.10.0PREDICTED: putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX161e-137EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A059AKI30.0A0A059AKI3_EUCGR; Uncharacterized protein
STRINGXP_010030420.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM58792747
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-133EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]