PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.I00402.1.p | ||||||||
Common Name | EUGRSUZ_I00402 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | B3 | ||||||||
Protein Properties | Length: 104aa MW: 11650.7 Da PI: 10.2176 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 31.2 | 3.9e-10 | 31 | 99 | 17 | 90 |
E--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 +++ kf+++h k +s++++ +++sW kli + +++ l +GW F +a L+egD++vF+l+++s + Eucgr.I00402.1.p 31 SVSVKFMRTHI-K--RSMQVVTIKHKNESWPAKLIKfpWDHGK---L-SGWFPFSRATSLCEGDVCVFELTKQSPT 99 56778888884.2..577888889999*******665655542...4.6********************9876554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 1.96E-10 | 26 | 97 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 1.9E-9 | 29 | 97 | IPR015300 | DNA-binding pseudobarrel domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 104 aa Download sequence Send to blast |
MLVARGCNVP CSAALEIARD FKSKHPTFIS SVSVKFMRTH IKRSMQVVTI KHKNESWPAK 60 LIKFPWDHGK LSGWFPFSRA TSLCEGDVCV FELTKQSPTV LEV* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.I00402.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018718135.1 | 4e-48 | PREDICTED: B3 domain-containing protein REM19-like | ||||
TrEMBL | A0A059ALD1 | 2e-70 | A0A059ALD1_EUCGR; Uncharacterized protein | ||||
STRING | XP_010027828.1 | 1e-43 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM14804 | 4 | 15 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.I00402.1.p |