PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.I00291.1.p | ||||||||
Common Name | EUGRSUZ_I00291 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | ERF | ||||||||
Protein Properties | Length: 331aa MW: 35512.8 Da PI: 9.1993 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 33.3 | 1.2e-10 | 134 | 163 | 2 | 35 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgk 35 +y+GVr+++ +g+W+AeIrd + + r++lg+ Eucgr.I00291.1.p 134 KYRGVRQRP-WGKWAAEIRDpF-----KaSRVWLGT 163 8********.**********66.....56*****98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 9.8E-15 | 133 | 163 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 7.29E-16 | 134 | 174 | No hit | No description |
PROSITE profile | PS51032 | 14.065 | 134 | 163 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 5.4E-5 | 134 | 163 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.99E-9 | 134 | 172 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 2.9E-12 | 134 | 178 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 331 aa Download sequence Send to blast |
MSIMVSALRR VVSGEVLSGD DQQQQFNLSG GYEPAALLGR SSSLDSVGVG QKRGRGDSTS 60 SSEFLVSQDS VAFGGFPQAG SSSSSDAREG HAGSTTVETA KADTADGTAP KYEYNYEAPT 120 TMAASRLDPT VRRKYRGVRQ RPWGKWAAEI RDPFKASRVW LGTGSKAKLN FPENVRLRQQ 180 PAPVASAAFP SATHFTISRE LPASGNFDAT GYDGQAPMQQ FPENDFREYH RDVAAHQERL 240 QGRTMSLYEQ MLFSNSSFGS QFQPAFSLSP SSSSSSSSVL ARSPNSSLFM PSPPNVTSRS 300 QESRRGSGDG AAVFSQHPWT DSSHYSSSSG * |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.I00291.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010027737.1 | 0.0 | PREDICTED: ethylene-responsive transcription factor ABR1 isoform X1 | ||||
TrEMBL | A0A059AJY4 | 0.0 | A0A059AJY4_EUCGR; Uncharacterized protein | ||||
STRING | XP_010027737.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM10 | 28 | 1650 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G43160.1 | 7e-20 | related to AP2 6 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.I00291.1.p |