PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.I00213.4.p | ||||||||
Common Name | EUGRSUZ_I00213 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 481aa MW: 53791 Da PI: 4.3153 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 142.5 | 2.4e-44 | 6 | 130 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 l+pGfrFhPtd elv +yLkkkv gk+++ e+i+evdiy++ Pw Lp ++ +++ +wyfF++r++kyatg r+nr+t+ g+Wk+tg+d++v Eucgr.I00213.4.p 6 LAPGFRFHPTDVELVLYYLKKKVLGKRFRN-EAIAEVDIYNFPPWALPgHARLSRDLKWYFFCPRERKYATGARTNRSTDYGFWKTTGNDRPV 97 579************************999.89***************433334666************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 + +g++vg ++L+f++ k+e+tdWvmheyrle Eucgr.I00213.4.p 98 IY-NGKTVGKIRSLIFHR---TKTERTDWVMHEYRLE 130 **.999***********4...44568*********85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.84E-53 | 3 | 152 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 52.149 | 6 | 152 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.8E-24 | 8 | 129 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 481 aa Download sequence Send to blast |
MAMRSLAPGF RFHPTDVELV LYYLKKKVLG KRFRNEAIAE VDIYNFPPWA LPGHARLSRD 60 LKWYFFCPRE RKYATGARTN RSTDYGFWKT TGNDRPVIYN GKTVGKIRSL IFHRTKTERT 120 DWVMHEYRLE DEDLKTKGVA QDTYVLCEIY EKDGRGPRNG AQYGAPFNEE EWDDDEEVDV 180 PSASGFTGEF ILPDMQQHSE RYCVGSTSNA CPAGPPQIMP SVVNVPAPAP ANDVTMADSQ 240 NLYEHLRSNG IFGDDIPATS CENDRVENLD SINLDGDHNA ENEKDDTFDG LEDLGPYHHV 300 DNFSFIHSDA NIFHTWDSYM ELDDFVAPLT SADGPAQSLC TSVNVDEEYF ELEDLVTPVN 360 CNGEAGQSNE VSVDSSYFNL GGNDGLVCSG TIPNPPVFAQ PLHGSDVTCN AEDLPQFNRH 420 SQLEGFEGCV DMHQEGHGVE CTNQEIVRYD VVAANSSIDN PDVGYVHACE NQGRGRSQFW 480 * |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 7e-39 | 1 | 153 | 12 | 166 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 7e-39 | 1 | 153 | 12 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 7e-39 | 1 | 153 | 12 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 7e-39 | 1 | 153 | 12 | 166 | NO APICAL MERISTEM PROTEIN |
4dul_A | 7e-39 | 1 | 153 | 12 | 166 | NAC domain-containing protein 19 |
4dul_B | 7e-39 | 1 | 153 | 12 | 166 | NAC domain-containing protein 19 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.I00213.4.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010027672.1 | 0.0 | PREDICTED: NAC domain-containing protein 82 isoform X9 | ||||
TrEMBL | A0A059AJN4 | 0.0 | A0A059AJN4_EUCGR; Uncharacterized protein | ||||
STRING | XP_010027667.1 | 0.0 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64060.1 | 1e-62 | NAC domain containing protein 103 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.I00213.4.p |