PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.I00099.1.p | ||||||||
Common Name | EUGRSUZ_I00099, LOC104418057 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 294aa MW: 34197.7 Da PI: 6.6072 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 155.6 | 2.1e-48 | 8 | 132 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+GfrFhPtd+el+++yL +k++++++++ +i+e+d+yk++Pw Lp+++ +ekewyfFs+rd+ky++g+r+nr++ +gyWkatg dk++ Eucgr.I00099.1.p 8 LPAGFRFHPTDDELMNDYLIRKCASHPISV-PFIAEIDLYKFDPWVLPEMALYGEKEWYFFSPRDRKYPNGSRPNRTAGTGYWKATGVDKPIG 99 799**************************9.88***************7666789*************************************9 PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++ g+kk Lvfy g+ap+g+kt+W+mheyrl Eucgr.I00099.1.p 100 R--PKTLGIKKALVFYVGKAPRGVKTNWIMHEYRL 132 8..778***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.79E-59 | 4 | 158 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 57.406 | 8 | 158 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.5E-25 | 9 | 132 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence Send to blast |
MKRAQLELPA GFRFHPTDDE LMNDYLIRKC ASHPISVPFI AEIDLYKFDP WVLPEMALYG 60 EKEWYFFSPR DRKYPNGSRP NRTAGTGYWK ATGVDKPIGR PKTLGIKKAL VFYVGKAPRG 120 VKTNWIMHEY RLANIDRSAR KKKNLRLDDW VLCRIYNKKG TIEKHFPSTH NETADFPEME 180 IKPQIVTPTA LNPYTSPQYA HSPMTTDHMY MDSSESVPKL HTDSSCSEHA ESRDLAWEKE 240 VQSEAKWDDW EKALDFQFDS VDNFLDDAFA NEQYQLDQFS PLQDMSMYLQ KSF* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-78 | 4 | 164 | 11 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.I00099.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010027567.1 | 0.0 | PREDICTED: NAC domain-containing protein 2 | ||||
Swissprot | Q39013 | 1e-119 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A059AL30 | 0.0 | A0A059AL30_EUCGR; Uncharacterized protein | ||||
STRING | XP_010027567.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM190 | 28 | 276 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-121 | NAC family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.I00099.1.p |
Entrez Gene | 104418057 |