PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.I00097.1.p | ||||||||
Common Name | EUGRSUZ_I00097 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 240aa MW: 27102.6 Da PI: 7.1114 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 96.9 | 3e-30 | 5 | 77 | 54 | 128 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + ++ g+kk Lvfy g+apkg+kt+W+mheyrl Eucgr.I00097.1.p 5 GEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGR--PKTLGIKKALVFYAGKAPKGVKTNWIMHEYRL 77 579************************************98..778***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 40.158 | 1 | 103 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 4.32E-35 | 3 | 103 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.2E-14 | 9 | 77 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence Send to blast |
MALYGEKEWY FFSPRDRKYP NGSRPNRAAG TGYWKATGAD KPIGRPKTLG IKKALVFYAG 60 KAPKGVKTNW IMHEYRLANV DRSAGKKNNS RLDDGVLCRI YNKKGTIEKH FPSAHDKPAE 120 FPEMETKPQI VVPAAMNPYN APPQYGSLMT MDHTYMDSSE SMPRLHTDSS CCSEHVVSPD 180 SACEKEVQSE VKLEGWEKAF DFQFESMDDF LDEAFAQGQY QLDLFSPLQD ASTYLQKPF* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-48 | 2 | 109 | 64 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.I00097.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010027561.1 | 0.0 | PREDICTED: NAC domain-containing protein 2 | ||||
Swissprot | Q39013 | 8e-86 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A059AJV0 | 0.0 | A0A059AJV0_EUCGR; Uncharacterized protein | ||||
STRING | XP_010027561.1 | 1e-180 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM190 | 28 | 276 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 3e-88 | NAC family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.I00097.1.p |