PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.I00095.1.p | ||||||||
Common Name | EUGRSUZ_I00095, LOC104418050 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 294aa MW: 33503 Da PI: 7.2809 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 158.3 | 3.1e-49 | 8 | 132 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+GfrFhPtdeelv++yL +k+++ ++++ vi+e+d+yk++PwdLp+++ +ekewyfFs+rd+ky++g+r+nra+ +g+Wkatg dk++ Eucgr.I00095.1.p 8 LPAGFRFHPTDEELVSHYLIRKCSSLPISA-PVIAEIDLYKFDPWDLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGFWKATGADKPIG 99 799*************************99.89***************7666789*************************************9 PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++ g+kk Lvf g+apkg+kt+W+mheyrl Eucgr.I00095.1.p 100 H--PKTLGIKKGLVFNAGKAPKGVKTNWIMHEYRL 132 9..778***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 7.85E-60 | 4 | 158 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 58.108 | 8 | 158 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.7E-25 | 9 | 132 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence Send to blast |
MKKAQLELPA GFRFHPTDEE LVSHYLIRKC SSLPISAPVI AEIDLYKFDP WDLPEMALYG 60 EKEWYFFSPR DRKYPNGSRP NRAAGTGFWK ATGADKPIGH PKTLGIKKGL VFNAGKAPKG 120 VKTNWIMHEY RLANVDRSAG QKKNSRLDDW VLCRIYNKKG TIEKHFPSTL SKPAEFPETE 180 IKPQIVMPGT LNLYTTPQYG HSPMTTDHVY MDSSESVPRL HTDSSCSEHV VSPDLACKKE 240 VQSGAKWEDW EKAPDFQFES MDDFLDEAFA QRQYQLDLFS TLQDVSTYLQ KPF* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-77 | 3 | 164 | 10 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.I00095.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010027560.1 | 0.0 | PREDICTED: NAC domain-containing protein 2 | ||||
Swissprot | Q39013 | 1e-115 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A059AJC0 | 0.0 | A0A059AJC0_EUCGR; Uncharacterized protein | ||||
STRING | XP_010027560.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM190 | 28 | 276 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-117 | NAC family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.I00095.1.p |
Entrez Gene | 104418050 |