PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.I00059.4.p | ||||||||
Common Name | EUGRSUZ_I00059, LOC104418024 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 294aa MW: 33474.9 Da PI: 6.3167 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 158.6 | 2.5e-49 | 8 | 132 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+GfrFhPtd+elv++yL +k++++ +++ +i+e+d+yk++Pw Lp+++ +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ Eucgr.I00059.4.p 8 LPAGFRFHPTDDELVNDYLIRKCASHAISV-PFIAEIDLYKFDPWVLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIG 99 799**************************9.88***************7666789*************************************9 PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++ g+kk Lvfy g+ap+g+kt+W+mheyrl Eucgr.I00059.4.p 100 R--PKTLGIKKALVFYAGKAPRGVKTNWIMHEYRL 132 8..778***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.57E-58 | 4 | 158 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 57.226 | 8 | 158 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.6E-26 | 9 | 132 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence Send to blast |
MKRAQLELPA GFRFHPTDDE LVNDYLIRKC ASHAISVPFI AEIDLYKFDP WVLPEMALYG 60 EKEWYFFSPR DRKYPNGSRP NRAAGTGYWK ATGADKPIGR PKTLGIKKAL VFYAGKAPRG 120 VKTNWIMHEY RLANIDRSAG KKKNSRLDDW VLCRIHNKKG TIEKHSPSTL NETADFPEVE 180 IKPQIVMPAA LNPYTSPQYA DSPMTTDHMY TDSSEFLPKL HKDSSCSEHA ASPGSACEKE 240 VQSEVKWDDW EKALDFQFGS MDDFLDDALV QGQFQLDQFS PLEDMSMYLQ QSF* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-79 | 4 | 164 | 11 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.I00059.4.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010027534.1 | 0.0 | PREDICTED: NAC domain-containing protein 2 | ||||
Swissprot | Q39013 | 1e-115 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A059AJR8 | 0.0 | A0A059AJR8_EUCGR; Uncharacterized protein | ||||
STRING | XP_010027534.1 | 0.0 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-117 | NAC family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.I00059.4.p |
Entrez Gene | 104418024 |